Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU7-200P-201ENST00000516105 62 ntBASIC2.09□□□□□ -2.07
SMC1BQ8NDV3 SNORA44.1-201ENST00000517031 108 ntBASIC2.09□□□□□ -2.07
SMC1BQ8NDV3 MTND5P41-201ENST00000517498 206 ntBASIC2.09□□□□□ -2.07
SMC1BQ8NDV3 MIR4285-201ENST00000581001 85 ntBASIC2.09□□□□□ -2.07
SMC1BQ8NDV3 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
SMC1BQ8NDV3 AC015726.2-201ENST00000620112 122 ntBASIC2.09□□□□□ -2.07
SMC1BQ8NDV3 Y_RNA.205-201ENST00000364128 113 ntBASIC2.08□□□□□ -2.08
SMC1BQ8NDV3 MIR194-1-201ENST00000384892 85 ntBASIC2.08□□□□□ -2.08
SMC1BQ8NDV3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SMC1BQ8NDV3 SNORA75.5-201ENST00000391291 81 ntBASIC2.08□□□□□ -2.08
SMC1BQ8NDV3 AL645939.4-201ENST00000604495 135 ntBASIC2.08□□□□□ -2.08
SMC1BQ8NDV3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.08□□□□□ -2.08
SMC1BQ8NDV3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SMC1BQ8NDV3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 RNY1P5-201ENST00000383890 115 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 RNU6-746P-201ENST00000384112 109 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 MIR598-201ENST00000384868 97 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 SUMO1P3-201ENST00000439961 304 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 RNU7-25P-201ENST00000516544 62 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 SUMO2P16-201ENST00000519475 264 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 AL157834.3-201ENST00000615543 103 ntBASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMC1BQ8NDV3 RNU1-42P-201ENST00000364033 160 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 RNU4-11P-201ENST00000365287 132 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 MIR513A1-201ENST00000385138 129 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 SNORA18.4-201ENST00000516440 124 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 AC007751.1-201ENST00000529260 376 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 AL365205.2-201ENST00000594586 68 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 AC095038.3-201ENST00000634439 195 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 MIR3658-201ENST00000636291 56 ntBASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SMC1BQ8NDV3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 RNA5SP259-201ENST00000365541 109 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 MIR518F-201ENST00000384973 87 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 MIR513C-201ENST00000401352 84 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 RNU6-830P-201ENST00000516353 107 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AC090142.3-201ENST00000519012 385 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AC112693.2-201ENST00000556538 232 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AL365434.2-201ENST00000607979 234 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AC134878.1-201ENST00000619901 243 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 AC091895.1-201ENST00000624494 256 ntBASIC2.05□□□□□ -2.08
SMC1BQ8NDV3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 SNORD115-28-201ENST00000363931 81 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 RNU6-818P-201ENST00000364837 108 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 MIR30A-201ENST00000385092 71 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 MIR516B2-201ENST00000385190 85 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 RNA5SP127-201ENST00000411051 133 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 AC092991.1-201ENST00000477176 376 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 MIR4421-201ENST00000578133 69 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 MIR3129-201ENST00000581095 76 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 MIR3133-201ENST00000583157 78 ntBASIC2.04□□□□□ -2.08
SMC1BQ8NDV3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 RNU6-60P-201ENST00000364792 103 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.410-201ENST00000383992 113 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 snoU13.9-201ENST00000458927 103 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 AC106754.2-201ENST00000623006 233 ntBASIC2.03□□□□□ -2.08
SMC1BQ8NDV3 RNU6-774P-201ENST00000363238 107 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 SNORA2.2-201ENST00000365473 135 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 SNORA1-201ENST00000384107 130 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 RNU6-125P-201ENST00000384505 107 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 MIR548A2-201ENST00000384956 97 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 AC087499.4-201ENST00000448505 178 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 RNU6-322P-201ENST00000516010 103 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 RNU1-92P-201ENST00000517017 135 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 MIR548X2-201ENST00000579776 100 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
SMC1BQ8NDV3 Y_RNA.178-201ENST00000363832 102 ntBASIC2.01□□□□□ -2.09
SMC1BQ8NDV3 MIR624-201ENST00000385217 97 ntBASIC2.01□□□□□ -2.09
SMC1BQ8NDV3 RNU6-588P-201ENST00000410281 105 ntBASIC2.01□□□□□ -2.09
SMC1BQ8NDV3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.01□□□□□ -2.09
SMC1BQ8NDV3 SNORA77B-201ENST00000578179 125 ntBASIC2.01□□□□□ -2.09
SMC1BQ8NDV3 FAM106DP-201ENST00000586416 501 ntBASIC2.01□□□□□ -2.09
SMC1BQ8NDV3 AL442644.1-201ENST00000454390 3105 ntBASIC2.01□□□□□ -2.09
SMC1BQ8NDV3 ZNF209P-201ENST00000593450 2304 ntBASIC2□□□□□ -2.09
SMC1BQ8NDV3 RNU6-1082P-201ENST00000364574 107 ntBASIC2□□□□□ -2.09
SMC1BQ8NDV3 SNORA1.2-201ENST00000365189 134 ntBASIC2□□□□□ -2.09
SMC1BQ8NDV3 MIR526A1-201ENST00000384897 85 ntBASIC2□□□□□ -2.09
SMC1BQ8NDV3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.99□□□□□ -2.09
SMC1BQ8NDV3 RNU6-53P-201ENST00000365367 106 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms