Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MIR4491-201ENST00000581087 68 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 AC005899.2-201ENST00000584353 90 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 MIR3925-201ENST00000584674 77 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 AC092447.9-201ENST00000603395 144 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 AL080274.1-201ENST00000605565 220 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 SNORA70.25-201ENST00000612741 95 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 AC022079.1-201ENST00000621546 602 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 AC138305.3-201ENST00000624988 240 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 U6.92-201ENST00000636464 89 ntBASIC-0.27□□□□□ -2.45
ZNF439Q8NDP4 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 SNORD115-28-201ENST00000363931 81 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 SNORA27-201ENST00000384323 126 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 SNORD116-1-201ENST00000384335 95 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 MIR548A2-201ENST00000384956 97 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 SNORD115-47-201ENST00000391226 86 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 POLR2KP2-201ENST00000438155 177 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 AC087499.4-201ENST00000448505 178 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 SNORD4A-201ENST00000459174 72 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 RNU7-45P-201ENST00000459460 63 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 RPS29P24-201ENST00000486345 171 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 MIR4639-201ENST00000584938 69 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 AC103591.3-201ENST00000608684 209 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 AC122108.2-201ENST00000611946 526 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 PISRT1.1-201ENST00000616930 107 ntBASIC-0.28□□□□□ -2.45
ZNF439Q8NDP4 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 SNORA72.4-201ENST00000384174 132 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 RNU6-269P-201ENST00000391077 97 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 SNORA26.6-201ENST00000391256 115 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 RNU4-30P-201ENST00000410245 143 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 RNU6-383P-201ENST00000410864 94 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 AC096644.2-201ENST00000429278 159 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 MTND1P29-201ENST00000448112 647 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 RNU2-11P-201ENST00000459191 187 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 RNU7-53P-201ENST00000516705 60 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 RNU6-135P-201ENST00000516769 101 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 AC245505.1-201ENST00000556398 224 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 AC011921.3-201ENST00000605540 361 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 AL662814.1-201ENST00000617364 121 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 AL669831.3-213ENST00000636676 183 ntBASIC-0.29□□□□□ -2.46
ZNF439Q8NDP4 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.3□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.3□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.3□□□□□ -2.46
ZNF439Q8NDP4 MTND3P8-201ENST00000412909 339 ntBASIC-0.3□□□□□ -2.46
ZNF439Q8NDP4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.3□□□□□ -2.46
ZNF439Q8NDP4 RNU6-180P-201ENST00000516697 61 ntBASIC-0.3□□□□□ -2.46
ZNF439Q8NDP4 AL021707.8-201ENST00000609428 183 ntBASIC-0.3□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 RNU6-652P-201ENST00000365488 107 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 RNU6-535P-201ENST00000384722 107 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 MIR215-201ENST00000384858 110 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 MIR181A1-201ENST00000385026 110 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 RNU6-308P-201ENST00000390957 107 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 MIR548I3-201ENST00000408378 149 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 AC107399.1-201ENST00000451226 265 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 RNU6-693P-201ENST00000516134 107 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 SNORA25.16-201ENST00000516741 121 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 MIR548AD-201ENST00000584780 82 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 AL049861.1-201ENST00000603130 150 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 U2.1-201ENST00000618978 145 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 MIR6717-201ENST00000622747 73 ntBASIC-0.31□□□□□ -2.46
ZNF439Q8NDP4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU4-80P-201ENST00000363200 141 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 SNORA18.1-201ENST00000363418 128 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 SNORA63.5-201ENST00000363548 123 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6-726P-201ENST00000364680 107 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 SNORD61-201ENST00000384252 73 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 MIR7-2-201ENST00000384970 110 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 MIR214-201ENST00000385214 110 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 SNORD77.3-201ENST00000391113 65 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6-510P-201ENST00000391239 108 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 AF228730.3-201ENST00000436691 102 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6-998P-201ENST00000515894 101 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6-307P-201ENST00000516743 106 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU6-765P-201ENST00000516916 99 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 RNU2-31P-201ENST00000516954 155 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 AC144568.1-201ENST00000520139 137 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 AC124312.5-201ENST00000604451 268 ntBASIC-0.32□□□□□ -2.46
ZNF439Q8NDP4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms