Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 RNU6-888P-201ENST00000363010 101 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 SNORD45.3-201ENST00000363836 72 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 RNU6-580P-201ENST00000365159 107 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 RNU6-484P-201ENST00000384016 107 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 RNU6-125P-201ENST00000384505 107 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 RNU6-1160P-201ENST00000384546 104 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 MT-TW-201ENST00000387382 68 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 SNORA17.3-201ENST00000391159 129 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 MIR548F4-201ENST00000408515 105 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 AC067940.1-201ENST00000458411 300 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 RNU6-693P-201ENST00000516134 107 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 SNORA18.4-201ENST00000516440 124 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 MIR8062-201ENST00000621515 85 ntBASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.327-201ENST00000365201 102 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 SNORD61-201ENST00000384252 73 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 RNU6-472P-201ENST00000384299 107 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 SNORA40.5-201ENST00000391061 128 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 AC107297.1-201ENST00000459991 176 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 RNU6-365P-201ENST00000517113 106 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 AC006504.6-201ENST00000590142 199 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 7SK.10-201ENST00000621414 298 ntBASIC0.69□□□□□ -2.3
CCDC197Q8NCU1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 SNORD99-201ENST00000408612 74 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 RNU2-55P-201ENST00000411146 174 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 AC090844.1-201ENST00000422019 156 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 AP003484.1-201ENST00000530974 250 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 MIR4264-201ENST00000583520 66 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 MIR4282-201ENST00000583613 67 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 AC097639.2-201ENST00000603159 172 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 MIR6857-201ENST00000613267 93 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 AC134878.1-201ENST00000619901 243 ntBASIC0.68□□□□□ -2.3
CCDC197Q8NCU1 RNU6-369P-201ENST00000362515 102 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 snoU2_19.4-201ENST00000364329 80 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 SNORA63C-201ENST00000364578 129 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 RNY3P5-201ENST00000384127 102 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 RNU7-73P-201ENST00000458743 63 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 SNORD36C-201ENST00000516733 66 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 AP000753.3-201ENST00000604083 169 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 AC104465.1-201ENST00000611365 139 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 AL136317.1-201ENST00000612653 226 ntBASIC0.67□□□□□ -2.3
CCDC197Q8NCU1 AC023934.1-201ENST00000574529 2389 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 RNU6-238P-201ENST00000363313 106 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 SNORA27-201ENST00000384323 126 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.574-201ENST00000384766 95 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 MT-TT-201ENST00000387460 66 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 RNU6-205P-201ENST00000390858 107 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 RNU6-913P-201ENST00000390913 95 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 SNORA26-201ENST00000391286 122 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 RNU7-67P-201ENST00000459003 62 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 snoU13.21-201ENST00000459368 105 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 RNU6-1299P-201ENST00000516316 100 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 RNU6-504P-201ENST00000516568 104 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 RNU6-958P-201ENST00000516995 106 ntBASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CCDC197Q8NCU1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.432-201ENST00000384087 111 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 MIR606-201ENST00000384851 96 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 MIR616-201ENST00000385293 97 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 MIR1302-6-201ENST00000408466 90 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 AC244023.1-201ENST00000426884 112 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 AF228730.3-201ENST00000436691 102 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 RPS29P24-201ENST00000486345 171 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 AC108729.3-201ENST00000513484 108 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 RNA5SP153-201ENST00000516498 76 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 AC242498.1-201ENST00000604134 111 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 MIR8055-201ENST00000610739 97 ntBASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.65□□□□□ -2.31
CCDC197Q8NCU1 MIR1-1-201ENST00000362147 71 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 SNORA63-201ENST00000363450 132 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 AL606845.1-201ENST00000404881 255 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 SNRPGP8-201ENST00000454064 226 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 RNU6-453P-201ENST00000516819 85 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 AL117187.1-201ENST00000555482 181 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 snoU13.31-201ENST00000607291 104 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.812-201ENST00000610788 101 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.784-201ENST00000613803 101 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.787-201ENST00000616522 101 ntBASIC0.64□□□□□ -2.31
CCDC197Q8NCU1 Y_RNA.780-201ENST00000617336 101 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms