Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 Y_RNA.771-201ENST00000598668 102 ntBASIC0.7□□□□□ -2.3
CCDC71LQ8N9Z2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.7□□□□□ -2.3
CCDC71LQ8N9Z2 AC243994.1-201ENST00000618627 109 ntBASIC0.7□□□□□ -2.3
CCDC71LQ8N9Z2 AL365265.1-201ENST00000621045 234 ntBASIC0.7□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.789-201ENST00000622480 102 ntBASIC0.7□□□□□ -2.3
CCDC71LQ8N9Z2 MTND1P7-201ENST00000632801 297 ntBASIC0.7□□□□□ -2.3
CCDC71LQ8N9Z2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC71LQ8N9Z2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 SNORD115-28-201ENST00000363931 81 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 snoU2_19.4-201ENST00000364329 80 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-654P-201ENST00000364373 107 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.269-201ENST00000364685 89 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.416-201ENST00000384014 113 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.494-201ENST00000384432 111 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 MIR200A-201ENST00000384875 90 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 MIR1302-7-201ENST00000408841 72 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU2-38P-201ENST00000410856 79 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 MTND2P23-201ENST00000422990 651 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 AL358176.2-201ENST00000425769 204 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 SNORD2.1-201ENST00000458762 69 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 AC107297.1-201ENST00000459991 176 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-1299P-201ENST00000516316 100 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-453P-201ENST00000516819 85 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-1270P-201ENST00000517128 108 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 AC007751.1-201ENST00000529260 376 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 MIR4643-201ENST00000577473 78 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 MIR4452-201ENST00000583004 71 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 AC131055.1-201ENST00000584626 316 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 MIR6516-201ENST00000630554 81 ntBASIC0.69□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.199-201ENST00000364014 102 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-53P-201ENST00000365367 106 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.352-201ENST00000365439 102 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 SNORD61-201ENST00000384252 73 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.508-201ENST00000384502 114 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 AL606845.1-201ENST00000404881 255 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 RNA5SP95-201ENST00000410319 137 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 RNU2-70P-201ENST00000410718 179 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 AL392103.1-201ENST00000447000 198 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 RNU7-67P-201ENST00000459003 62 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 SCARNA15.1-201ENST00000516384 125 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 FAM71BP1-201ENST00000604431 523 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CCDC71LQ8N9Z2 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.37-201ENST00000362606 108 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.162-201ENST00000363683 102 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.288-201ENST00000364854 92 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 SNORA2B-201ENST00000384583 137 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 MIR518F-201ENST00000384973 87 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 SNORD89-201ENST00000390981 114 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 snoU13.18-201ENST00000459483 104 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 RNU11-2P-201ENST00000516898 142 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 AC036111.3-201ENST00000526389 112 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 MIR4282-201ENST00000583613 67 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.91-201ENST00000363042 107 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-396P-201ENST00000365369 105 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.432-201ENST00000384087 111 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 MIR548A2-201ENST00000384956 97 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 MIR616-201ENST00000385293 97 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 SNORA26-201ENST00000391286 122 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 AC087499.4-201ENST00000448505 178 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 SNRPGP8-201ENST00000454064 226 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 SNORD127-201ENST00000458892 86 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 RNU2-13P-201ENST00000515909 113 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 RNA5SP220-201ENST00000516298 104 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-504P-201ENST00000516568 104 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-126P-201ENST00000516685 103 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 RNU6-958P-201ENST00000516995 106 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CCDC71LQ8N9Z2 Y_RNA.76-201ENST00000362931 109 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.262-201ENST00000364641 102 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.634-201ENST00000364811 113 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.304-201ENST00000365011 112 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD24-201ENST00000383884 75 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-484P-201ENST00000384016 107 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.477-201ENST00000384352 108 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 MIR568-201ENST00000385036 95 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-1228P-201ENST00000391014 107 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 MIR1302-3-201ENST00000408128 138 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-994P-201ENST00000410507 111 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 AL035398.1-201ENST00000430869 322 ntBASIC0.65□□□□□ -2.31
CCDC71LQ8N9Z2 MTCYBP9-201ENST00000431021 303 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 295.3 ms