Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 SNORA31.4-201ENST00000516049 129 ntBASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 RNY4P20-201ENST00000516678 93 ntBASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 AC106754.2-201ENST00000623006 233 ntBASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 AP000648.3-201ENST00000623539 4507 ntBASIC2.14□□□□□ -2.07
TRIM48Q8IWZ4 AL442644.1-201ENST00000454390 3105 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-34-201ENST00000362441 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-12-201ENST00000362583 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-29-201ENST00000362834 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-9-201ENST00000362912 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-21-201ENST00000362963 81 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-14-201ENST00000363090 81 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-13-201ENST00000363358 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-41-201ENST00000363608 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-11-201ENST00000363616 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-5-201ENST00000363633 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-39-201ENST00000363694 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-4-201ENST00000363810 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-16-201ENST00000363887 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-6-201ENST00000363942 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-42-201ENST00000364273 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-15-201ENST00000364809 81 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-1-201ENST00000364961 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-26-201ENST00000365067 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-10-201ENST00000365073 81 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-43-201ENST00000365503 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-36-201ENST00000365629 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 MIR570-201ENST00000384917 97 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD28B-201ENST00000390993 75 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 RNU7-45P-201ENST00000459460 63 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SUMO2P16-201ENST00000519475 264 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 SNORD115-40-201ENST00000606510 82 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 AC009831.4-201ENST00000620744 325 ntBASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM48Q8IWZ4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 MIR302B-201ENST00000362188 73 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 MIR424-201ENST00000362227 98 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 Y_RNA.454-201ENST00000384224 113 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 AC063976.4-201ENST00000421971 163 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 RNU2-11P-201ENST00000459191 187 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 RNU7-164P-201ENST00000459221 62 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 RPS29P24-201ENST00000486345 171 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 RNU6-998P-201ENST00000515894 101 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 RNU6-958P-201ENST00000516995 106 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 AC121758.2-201ENST00000553271 193 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 MIR548AR-201ENST00000582191 57 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 FAM106DP-201ENST00000586416 501 ntBASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM48Q8IWZ4 MT-TI-201ENST00000387365 69 ntBASIC2.11□□□□□ -2.07
TRIM48Q8IWZ4 RNU6-360P-201ENST00000390944 104 ntBASIC2.11□□□□□ -2.07
TRIM48Q8IWZ4 AC107297.1-201ENST00000459991 176 ntBASIC2.11□□□□□ -2.07
TRIM48Q8IWZ4 IGKV3-31-201ENST00000523109 329 ntBASIC2.11□□□□□ -2.07
TRIM48Q8IWZ4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM48Q8IWZ4 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
TRIM48Q8IWZ4 AC095038.3-201ENST00000634439 195 ntBASIC2.11□□□□□ -2.07
TRIM48Q8IWZ4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 SNORA67.1-201ENST00000364749 141 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 Y_RNA.298-201ENST00000364960 107 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 RNU6-439P-201ENST00000384188 106 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 RNU6-880P-201ENST00000384526 107 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 Y_RNA.549-201ENST00000384657 102 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 SNORA64-201ENST00000384674 134 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 RNU6-1104P-201ENST00000384723 104 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 SNORD123-201ENST00000459473 70 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 RNU7-96P-201ENST00000459535 64 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 COX6CP6-201ENST00000490840 228 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 RNU7-123P-201ENST00000515911 60 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 RNU2-35P-201ENST00000516446 142 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 AC022523.2-201ENST00000561045 150 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 AC007012.1-201ENST00000567192 175 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 MIR4305-201ENST00000583252 102 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
TRIM48Q8IWZ4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM48Q8IWZ4 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
TRIM48Q8IWZ4 MIR524-201ENST00000385242 87 ntBASIC2.09□□□□□ -2.07
TRIM48Q8IWZ4 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
TRIM48Q8IWZ4 AL035398.1-201ENST00000430869 322 ntBASIC2.09□□□□□ -2.07
TRIM48Q8IWZ4 RNU7-67P-201ENST00000459003 62 ntBASIC2.09□□□□□ -2.07
TRIM48Q8IWZ4 UBL5P3-201ENST00000475112 231 ntBASIC2.09□□□□□ -2.07
TRIM48Q8IWZ4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
TRIM48Q8IWZ4 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.08
TRIM48Q8IWZ4 SNORA1.2-201ENST00000365189 134 ntBASIC2.08□□□□□ -2.08
TRIM48Q8IWZ4 snoU13.26-201ENST00000459452 105 ntBASIC2.08□□□□□ -2.08
TRIM48Q8IWZ4 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
TRIM48Q8IWZ4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM48Q8IWZ4 MIR219B-201ENST00000637023 88 ntBASIC2.08□□□□□ -2.08
TRIM48Q8IWZ4 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms