Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-966P-201ENST00000516479 104 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 MTATP6P15-201ENST00000527233 835 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 AC132825.6-201ENST00000638861 357 ntBASIC-0.95□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 RNU6-291P-201ENST00000384720 107 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 RNA5SP484-201ENST00000458857 111 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 RNU6-436P-201ENST00000516171 114 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 SNORA25.13-201ENST00000516395 103 ntBASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.96□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 RNU6-601P-201ENST00000384540 107 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 SNORD12C-201ENST00000386307 89 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 AC098614.3-201ENST00000438957 440 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 AC091179.3-201ENST00000474761 144 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 AC091951.2-201ENST00000500762 203 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 AC145350.1-201ENST00000567426 208 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 MIR4775-201ENST00000581168 75 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 AC027807.2-201ENST00000616099 408 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 EIF1P2-201ENST00000428233 350 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 MTND1P27-201ENST00000451117 902 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 SNORA40.9-201ENST00000515895 93 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 POLR3GP2-201ENST00000588366 668 ntBASIC-0.97□□□□□ -2.56
CSPG4Q6UVK1 RNU4-92P-201ENST00000363783 136 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 MIR548A2-201ENST00000384956 97 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 AL603910.2-201ENST00000407268 136 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 AC006566.1-201ENST00000608943 513 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 RNU6-576P-201ENST00000390854 102 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 RNU6-913P-201ENST00000390913 95 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 RNU4-83P-201ENST00000410863 133 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 RNU7-13P-201ENST00000516413 62 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 RNU6-980P-201ENST00000516925 103 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 SNORA40.17-201ENST00000517256 115 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 MTND4P7-201ENST00000523876 130 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 AP003357.1-201ENST00000604497 148 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.98□□□□□ -2.57
CSPG4Q6UVK1 RNU6-82P-201ENST00000363970 107 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU4-28P-201ENST00000364739 141 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 SNORD115-35-201ENST00000365122 82 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU2-14P-201ENST00000411053 191 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU7-74P-201ENST00000459104 62 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 MTCO2P30-201ENST00000503662 364 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU6-531P-201ENST00000516694 104 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 MIR5696-201ENST00000578474 85 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 AC245014.2-201ENST00000603689 287 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU6-489P-201ENST00000618289 107 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 AC072046.2-201ENST00000618366 268 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 MIR6717-201ENST00000622747 73 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNA5SP133-201ENST00000363368 119 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU4-75P-201ENST00000364621 146 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 SNORD77.3-201ENST00000391113 65 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 AL031003.1-201ENST00000404229 172 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNA5SP475-201ENST00000410568 110 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 AC097635.1-201ENST00000450678 155 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 MIR5583-1-201ENST00000580941 59 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 MIR548AE1-201ENST00000583292 70 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 MIR5692C1-201ENST00000585309 91 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 AC018714.1-201ENST00000605028 208 ntBASIC-0.99□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.159-201ENST00000363674 87 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 RNY1P13-201ENST00000365030 105 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 RNU6-154P-201ENST00000384306 106 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 SNORA18-201ENST00000384416 132 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 RNU6-809P-201ENST00000384461 107 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MIR124-2-201ENST00000385081 109 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MIRLET7B-201ENST00000385140 83 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1□□□□□ -2.57
CSPG4Q6UVK1 AC084290.1-201ENST00000434995 374 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 FCF1P4-201ENST00000448326 183 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 SNORD11-201ENST00000459124 84 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1□□□□□ -2.57
CSPG4Q6UVK1 AC008507.4-201ENST00000585464 127 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MIR3674-201ENST00000636576 68 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MIR342-201ENST00000362212 99 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 RNU6-571P-201ENST00000384128 107 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 RNU6-606P-201ENST00000384721 111 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MIR548K-201ENST00000408406 116 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MIR548O-201ENST00000408583 114 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms