Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
NIPAL3Q6P499 MIR938-201ENST00000401216 83 ntBASIC0.33□□□□□ -2.36
NIPAL3Q6P499 AC091959.1-201ENST00000495857 238 ntBASIC0.33□□□□□ -2.36
NIPAL3Q6P499 MIR5692C2-201ENST00000577959 77 ntBASIC0.33□□□□□ -2.36
NIPAL3Q6P499 MIR4795-201ENST00000584182 89 ntBASIC0.33□□□□□ -2.36
NIPAL3Q6P499 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
NIPAL3Q6P499 uc_338.22-201ENST00000622722 187 ntBASIC0.33□□□□□ -2.36
NIPAL3Q6P499 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 SNORD115-46-201ENST00000390982 71 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 SNORA40.5-201ENST00000391061 128 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 MTND4LP30-201ENST00000454092 297 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 RNU7-73P-201ENST00000458743 63 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 RNU7-56P-201ENST00000458744 62 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.637-201ENST00000459424 114 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 RNU7-53P-201ENST00000516705 60 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.715-201ENST00000517082 110 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 MIR548S-201ENST00000581352 82 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 AC037487.3-201ENST00000606668 112 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 AC092634.7-201ENST00000621022 103 ntBASIC0.32□□□□□ -2.36
NIPAL3Q6P499 AC010332.2-201ENST00000613083 1904 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 RNU4-73P-201ENST00000363164 141 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.355-201ENST00000365462 98 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 RNU6-514P-201ENST00000384208 107 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 MTND4P19-201ENST00000446659 478 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 MIR18B-201ENST00000454574 71 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.639-201ENST00000458981 102 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 snoU13.18-201ENST00000459483 104 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 SNORD77.4-201ENST00000516158 81 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.31□□□□□ -2.36
NIPAL3Q6P499 AL133255.1-201ENST00000606374 441 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.31□□□□□ -2.36
NIPAL3Q6P499 AC090971.5-201ENST00000621102 293 ntBASIC0.31□□□□□ -2.36
NIPAL3Q6P499 SNORA27-201ENST00000384323 126 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RNU6-364P-201ENST00000384387 107 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.486-201ENST00000384398 107 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.508-201ENST00000384502 114 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 MIR518F-201ENST00000384973 87 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 MT-TD-201ENST00000387419 68 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RNU6-679P-201ENST00000391003 106 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 BTF3P11-201ENST00000426582 477 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RNU6-693P-201ENST00000516134 107 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RNU6-126P-201ENST00000516685 103 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RNU6-897P-201ENST00000517135 105 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 AC007751.1-201ENST00000529260 376 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 RAC1P9-201ENST00000604990 392 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 MIR6740-201ENST00000618268 113 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 Z97988.1-201ENST00000637697 135 ntBASIC0.3□□□□□ -2.36
NIPAL3Q6P499 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
NIPAL3Q6P499 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 SNORA25.1-201ENST00000362326 128 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.37-201ENST00000362606 108 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 RNU6-1272P-201ENST00000362776 107 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 SNORA1.1-201ENST00000364671 133 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 RNU6-290P-201ENST00000365212 101 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.395-201ENST00000383945 109 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 RNU6-913P-201ENST00000390913 95 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.581-201ENST00000391017 97 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 SNORA53-201ENST00000391141 249 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 RPS29P24-201ENST00000486345 171 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 MIR8055-201ENST00000610739 97 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 uc_338.6-201ENST00000613544 171 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.804-201ENST00000615262 101 ntBASIC0.29□□□□□ -2.36
NIPAL3Q6P499 MIR369-201ENST00000362155 70 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 MIR588-201ENST00000384900 83 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-1319P-201ENST00000390855 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-747P-201ENST00000390928 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-241P-201ENST00000391148 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.587-201ENST00000391210 103 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 MIR1257-201ENST00000408490 117 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-447P-201ENST00000410293 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-101P-201ENST00000410323 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-1118P-201ENST00000410382 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-1076P-201ENST00000410397 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-355P-201ENST00000410427 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-791P-201ENST00000410467 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-705P-201ENST00000410601 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-1100P-201ENST00000410691 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-860P-201ENST00000410860 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-1217P-201ENST00000411276 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU6-785P-201ENST00000411324 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 SNORA25.12-201ENST00000516202 82 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 RNU2-31P-201ENST00000516954 155 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 U6.90-201ENST00000614007 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 U6.70-201ENST00000620287 104 ntBASIC0.28□□□□□ -2.36
NIPAL3Q6P499 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
NIPAL3Q6P499 RNY1-201ENST00000364228 113 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 RNU6-450P-201ENST00000364654 107 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 MIR598-201ENST00000384868 97 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 MIR125B2-201ENST00000385128 89 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 RNU6-823P-201ENST00000391042 103 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 RNU6-1165P-201ENST00000410119 107 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 SNORD71-201ENST00000411292 86 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 PMCHL1-202ENST00000423102 261 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 SNORA40.15-201ENST00000516884 107 ntBASIC0.27□□□□□ -2.37
NIPAL3Q6P499 RNU6-365P-201ENST00000517113 106 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms