Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-938P-201ENST00000411285 103 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 snoU13.16-201ENST00000459350 104 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 Y_RNA.666-201ENST00000516187 112 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 Y_RNA.804-201ENST00000615262 101 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 AL589743.1-201ENST00000551932 2712 ntBASIC0.46□□□□□ -2.34
ATL3Q6DD88 RNU6-934P-201ENST00000365154 107 ntBASIC0.45□□□□□ -2.34
ATL3Q6DD88 Y_RNA.486-201ENST00000384398 107 ntBASIC0.45□□□□□ -2.34
ATL3Q6DD88 MIR548O-201ENST00000408583 114 ntBASIC0.45□□□□□ -2.34
ATL3Q6DD88 MTCO2P24-201ENST00000515611 426 ntBASIC0.45□□□□□ -2.34
ATL3Q6DD88 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.45□□□□□ -2.34
ATL3Q6DD88 MIR4264-201ENST00000583520 66 ntBASIC0.45□□□□□ -2.34
ATL3Q6DD88 SNORD115-34-201ENST00000362441 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-12-201ENST00000362583 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-29-201ENST00000362834 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-9-201ENST00000362912 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-21-201ENST00000362963 81 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-14-201ENST00000363090 81 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-13-201ENST00000363358 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-41-201ENST00000363608 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-11-201ENST00000363616 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-5-201ENST00000363633 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-39-201ENST00000363694 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-4-201ENST00000363810 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-16-201ENST00000363887 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-6-201ENST00000363942 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 Y_RNA.214-201ENST00000364201 112 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-42-201ENST00000364273 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 RNU6-450P-201ENST00000364654 107 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-15-201ENST00000364809 81 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-1-201ENST00000364961 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-26-201ENST00000365067 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-10-201ENST00000365073 81 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-43-201ENST00000365503 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-36-201ENST00000365629 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 Y_RNA.431-201ENST00000384086 102 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 RNU6-205P-201ENST00000390858 107 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 ELOCP20-201ENST00000422460 345 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 AC091959.1-201ENST00000495857 238 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD77.4-201ENST00000516158 81 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 AL049861.1-201ENST00000603130 150 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 SNORD115-40-201ENST00000606510 82 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 MTND4P29-201ENST00000503122 1372 ntBASIC0.44□□□□□ -2.34
ATL3Q6DD88 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
ATL3Q6DD88 RNU6-1272P-201ENST00000362776 107 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 Y_RNA.217-201ENST00000364214 105 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 RNU6-326P-201ENST00000365480 107 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 Y_RNA.541-201ENST00000384640 113 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 MIR215-201ENST00000384858 110 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 MIR573-201ENST00000384964 99 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 MTATP6P23-201ENST00000440153 476 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.43□□□□□ -2.34
ATL3Q6DD88 AC087499.4-201ENST00000448505 178 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 AC023449.1-201ENST00000454464 154 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 RNU7-56P-201ENST00000458744 62 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 Y_RNA.641-201ENST00000459414 105 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 AC107297.1-201ENST00000459991 176 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 AP000753.3-201ENST00000604083 169 ntBASIC0.43□□□□□ -2.34
ATL3Q6DD88 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.43□□□□□ -2.34
ATL3Q6DD88 Y_RNA.68-201ENST00000362881 102 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 RNU6-290P-201ENST00000365212 101 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 Y_RNA.380-201ENST00000365663 111 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 MIR548A2-201ENST00000384956 97 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 SNORA40.5-201ENST00000391061 128 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 RNA5SP222-201ENST00000411039 105 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 SNORD83.1-201ENST00000411362 77 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 RNU7-73P-201ENST00000458743 63 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 RNU2-31P-201ENST00000516954 155 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 RNA5SP330-201ENST00000517096 96 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 Y_RNA.721-201ENST00000517207 102 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 MIR5688-201ENST00000580619 83 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 MIR4804-201ENST00000581683 73 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 AC020891.4-201ENST00000605745 93 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 uc_338.6-201ENST00000613544 171 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 AL109933.3-201ENST00000619095 188 ntBASIC0.42□□□□□ -2.34
ATL3Q6DD88 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
ATL3Q6DD88 RNA5SP257-201ENST00000363023 116 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 Y_RNA.178-201ENST00000363832 102 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 RNU6-770P-201ENST00000363929 105 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 SNORD115-28-201ENST00000363931 81 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 Y_RNA.389-201ENST00000383924 113 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 RNU6-913P-201ENST00000390913 95 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 BTF3P11-201ENST00000426582 477 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 RNU7-67P-201ENST00000459003 62 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 SNORA18.4-201ENST00000516440 124 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 SNORA27.4-201ENST00000516650 95 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 RNU6-958P-201ENST00000516995 106 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 MIR4724-201ENST00000579485 89 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 AL355297.3-201ENST00000604082 446 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 AP000942.4-201ENST00000604811 241 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 snoU18.1-201ENST00000629629 71 ntBASIC0.41□□□□□ -2.34
ATL3Q6DD88 Z97988.1-201ENST00000637697 135 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms