Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 snoU13.23-201ENST00000458863 104 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 AC108210.2-201ENST00000503681 201 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 RNU6-197P-201ENST00000516680 100 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 MIR4421-201ENST00000578133 69 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 MIR4791-201ENST00000607666 84 ntBASIC1.12□□□□□ -2.23
LRIF1Q5T3J3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.489-201ENST00000384410 101 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 MIR548A2-201ENST00000384956 97 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 SNORA40.5-201ENST00000391061 128 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 RPS26P48-201ENST00000491713 339 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 RNU6-111P-201ENST00000517179 105 ntBASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LRIF1Q5T3J3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 SNORA24-201ENST00000384096 131 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 MIR1185-1-201ENST00000408598 86 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 SEPT14P17-201ENST00000617978 177 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 AC243994.1-201ENST00000618627 109 ntBASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 MT-TG-201ENST00000387429 68 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 SNORA75.2-201ENST00000391138 150 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 SNORA75.3-201ENST00000391231 150 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 RNY3P16-201ENST00000516338 101 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 AP003484.1-201ENST00000530974 250 ntBASIC1.09□□□□□ -2.23
LRIF1Q5T3J3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 SNORA25.3-201ENST00000363205 127 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 MIR570-201ENST00000384917 97 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 RNU6-578P-201ENST00000390980 103 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 RNU6-493P-201ENST00000391321 108 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 RNU6-938P-201ENST00000411285 103 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 snoU13.16-201ENST00000459350 104 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 AP000942.4-201ENST00000604811 241 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 AL353997.5-201ENST00000618886 171 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 MTND1P7-201ENST00000632801 297 ntBASIC1.08□□□□□ -2.24
LRIF1Q5T3J3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 Y_RNA.200-201ENST00000364018 102 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 SNORA17.3-201ENST00000391159 129 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 Y_RNA.797-201ENST00000515977 94 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 RNU6-561P-201ENST00000516222 102 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 AC104984.5-201ENST00000586878 94 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 AC009779.6-201ENST00000603972 165 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 AC108706.1-201ENST00000611053 297 ntBASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LRIF1Q5T3J3 Y_RNA.188-201ENST00000363952 111 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 Y_RNA.435-201ENST00000384095 112 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 SNORA27-201ENST00000384323 126 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 MIR1302-7-201ENST00000408841 72 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 AF228730.3-201ENST00000436691 102 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 AL121914.1-201ENST00000450188 156 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 MIR2115-201ENST00000516657 100 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 AC015712.3-201ENST00000559380 164 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 MIR4308-201ENST00000580634 81 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 Z83818.1-201ENST00000603584 150 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 AP000942.3-201ENST00000603702 160 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 RNU2-4P-201ENST00000606190 192 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
LRIF1Q5T3J3 Y_RNA.83-201ENST00000363005 113 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 RNU6-923P-201ENST00000364753 107 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 RNU4-70P-201ENST00000384579 139 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 RNU7-67P-201ENST00000459003 62 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 RNU7-95P-201ENST00000459222 64 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 SNORA18.4-201ENST00000516440 124 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 RNU7-53P-201ENST00000516705 60 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 MIR4298-201ENST00000584380 73 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 AL353770.2-201ENST00000620024 78 ntBASIC1.05□□□□□ -2.24
LRIF1Q5T3J3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 301.8 ms