Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Y_RNA.370-201ENST00000365589 108 ntBASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 Y_RNA.521-201ENST00000384560 114 ntBASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 MIR548A2-201ENST00000384956 97 ntBASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-321P-201ENST00000410912 106 ntBASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 AC007751.1-201ENST00000529260 376 ntBASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 SNORA25.7-201ENST00000364375 127 ntBASIC1.95□□□□□ -2.1
CCDC144BQ3MJ40 Y_RNA.270-201ENST00000364693 104 ntBASIC1.95□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-1292P-201ENST00000383856 107 ntBASIC1.95□□□□□ -2.1
CCDC144BQ3MJ40 SEPT7P4-201ENST00000437076 306 ntBASIC1.95□□□□□ -2.1
CCDC144BQ3MJ40 MIR548AR-201ENST00000582191 57 ntBASIC1.95□□□□□ -2.1
CCDC144BQ3MJ40 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-34-201ENST00000362441 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-12-201ENST00000362583 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-29-201ENST00000362834 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-9-201ENST00000362912 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-21-201ENST00000362963 81 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-14-201ENST00000363090 81 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-13-201ENST00000363358 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-41-201ENST00000363608 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-11-201ENST00000363616 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-5-201ENST00000363633 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-39-201ENST00000363694 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-4-201ENST00000363810 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-16-201ENST00000363887 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-6-201ENST00000363942 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-42-201ENST00000364273 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-15-201ENST00000364809 81 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-1-201ENST00000364961 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-26-201ENST00000365067 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-10-201ENST00000365073 81 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-43-201ENST00000365503 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-36-201ENST00000365629 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORA70.7-201ENST00000384159 133 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 Y_RNA.537-201ENST00000384626 109 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-239P-201ENST00000390990 99 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORA40.5-201ENST00000391061 128 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-947P-201ENST00000516264 106 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 RNU7-181P-201ENST00000517234 74 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 AP003484.1-201ENST00000530974 250 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 AL365205.2-201ENST00000594586 68 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 AP001485.1-201ENST00000604799 199 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 SNORD115-40-201ENST00000606510 82 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 MIR8065-201ENST00000620577 100 ntBASIC1.94□□□□□ -2.1
CCDC144BQ3MJ40 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CCDC144BQ3MJ40 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-978P-201ENST00000364371 103 ntBASIC1.93□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-1189P-201ENST00000383958 107 ntBASIC1.93□□□□□ -2.1
CCDC144BQ3MJ40 Y_RNA.441-201ENST00000384123 112 ntBASIC1.93□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-1135P-201ENST00000411083 103 ntBASIC1.93□□□□□ -2.1
CCDC144BQ3MJ40 FTX_2.1-201ENST00000618816 94 ntBASIC1.93□□□□□ -2.1
CCDC144BQ3MJ40 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC144BQ3MJ40 RNA5SP48-201ENST00000363969 126 ntBASIC1.92□□□□□ -2.1
CCDC144BQ3MJ40 Y_RNA.241-201ENST00000364470 117 ntBASIC1.92□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-597P-201ENST00000365620 102 ntBASIC1.92□□□□□ -2.1
CCDC144BQ3MJ40 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC144BQ3MJ40 AL359821.1-201ENST00000605519 182 ntBASIC1.92□□□□□ -2.1
CCDC144BQ3MJ40 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC144BQ3MJ40 RNU4-84P-201ENST00000364200 139 ntBASIC1.91□□□□□ -2.1
CCDC144BQ3MJ40 AF228730.3-201ENST00000436691 102 ntBASIC1.91□□□□□ -2.1
CCDC144BQ3MJ40 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
CCDC144BQ3MJ40 CYP3A52P-201ENST00000563326 91 ntBASIC1.91□□□□□ -2.1
CCDC144BQ3MJ40 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
CCDC144BQ3MJ40 Y_RNA.393-201ENST00000383936 102 ntBASIC1.9□□□□□ -2.11
CCDC144BQ3MJ40 MIR1287-201ENST00000408492 90 ntBASIC1.9□□□□□ -2.11
CCDC144BQ3MJ40 AL133373.1-201ENST00000497098 94 ntBASIC1.9□□□□□ -2.11
CCDC144BQ3MJ40 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
CCDC144BQ3MJ40 MIR3129-201ENST00000581095 76 ntBASIC1.9□□□□□ -2.11
CCDC144BQ3MJ40 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.9□□□□□ -2.11
CCDC144BQ3MJ40 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC144BQ3MJ40 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 AP000648.3-201ENST00000623539 4507 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 MIR337-201ENST00000362281 93 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 SNORA1-201ENST00000384107 130 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 RNA5SP127-201ENST00000411051 133 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 RNU6-1054P-201ENST00000411293 104 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 TRMT112P2-201ENST00000512910 132 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 RNU6-970P-201ENST00000516312 107 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 SNORA18.4-201ENST00000516440 124 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 RNU6-165P-201ENST00000517170 99 ntBASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
CCDC144BQ3MJ40 SNORA27-201ENST00000384323 126 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 SNORA51.10-201ENST00000384418 136 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 Y_RNA.555-201ENST00000384673 110 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 SNORD28B-201ENST00000390993 75 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 SNORD77.3-201ENST00000391113 65 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 RNU2-13P-201ENST00000515909 113 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 MIR3646-201ENST00000578301 84 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 AL512598.1-201ENST00000610158 273 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 AL096861.1-201ENST00000610899 123 ntBASIC1.88□□□□□ -2.11
CCDC144BQ3MJ40 MIR624-201ENST00000385217 97 ntBASIC1.87□□□□□ -2.11
CCDC144BQ3MJ40 RNU6-938P-201ENST00000411285 103 ntBASIC1.87□□□□□ -2.11
CCDC144BQ3MJ40 RPS26P48-201ENST00000491713 339 ntBASIC1.87□□□□□ -2.11
CCDC144BQ3MJ40 RNU7-121P-201ENST00000516604 62 ntBASIC1.87□□□□□ -2.11
CCDC144BQ3MJ40 AC090821.2-201ENST00000523552 176 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms