Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SNORD115-34-201ENST00000362441 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-12-201ENST00000362583 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-29-201ENST00000362834 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-9-201ENST00000362912 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-21-201ENST00000362963 81 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-14-201ENST00000363090 81 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-13-201ENST00000363358 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-41-201ENST00000363608 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.153-201ENST00000363615 91 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-11-201ENST00000363616 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-5-201ENST00000363633 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.158-201ENST00000363651 101 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-39-201ENST00000363694 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-4-201ENST00000363810 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-16-201ENST00000363887 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-6-201ENST00000363942 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-42-201ENST00000364273 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.241-201ENST00000364470 117 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.276-201ENST00000364732 109 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-15-201ENST00000364809 81 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.293-201ENST00000364908 93 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-1-201ENST00000364961 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-26-201ENST00000365067 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-10-201ENST00000365073 81 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-43-201ENST00000365503 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-36-201ENST00000365629 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.376-201ENST00000365638 108 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.455-201ENST00000384230 98 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.460-201ENST00000384255 102 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 RNU6-913P-201ENST00000390913 95 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.587-201ENST00000391210 103 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 MIR548P-201ENST00000408336 84 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 MTND4LP30-201ENST00000454092 297 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 snoU13.16-201ENST00000459350 104 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 AC107297.1-201ENST00000459991 176 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 RNY3P15-201ENST00000516297 97 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORA18.4-201ENST00000516440 124 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORA27.4-201ENST00000516650 95 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 AC020661.2-201ENST00000560114 134 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 SNORD115-40-201ENST00000606510 82 ntBASIC0.45□□□□□ -2.34
RFX4Q33E94 Y_RNA.61-201ENST00000362835 102 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 Y_RNA.116-201ENST00000363292 103 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 RNU5E-4P-201ENST00000364931 120 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 MIR518E-201ENST00000385252 88 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 SNORA53-201ENST00000391141 249 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.44□□□□□ -2.34
RFX4Q33E94 MIR4264-201ENST00000583520 66 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 AL355297.3-201ENST00000604082 446 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 AP000942.4-201ENST00000604811 241 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 AC134878.1-201ENST00000619901 243 ntBASIC0.44□□□□□ -2.34
RFX4Q33E94 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RFX4Q33E94 Y_RNA.84-201ENST00000363011 104 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 SNORD115-28-201ENST00000363931 81 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 RNU6-867P-201ENST00000364956 107 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 RNU6-514P-201ENST00000384208 107 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 SNORD61-201ENST00000384252 73 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 MIR526A2-201ENST00000390198 65 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 RNU7-67P-201ENST00000459003 62 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 SNORD36C-201ENST00000516733 66 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 RNU6-958P-201ENST00000516995 106 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 AP003733.2-201ENST00000529409 171 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 MIR3171-201ENST00000584270 74 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 AP000753.3-201ENST00000604083 169 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 AC037487.3-201ENST00000606668 112 ntBASIC0.43□□□□□ -2.34
RFX4Q33E94 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
RFX4Q33E94 Y_RNA.37-201ENST00000362606 108 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 RNU6-934P-201ENST00000365154 107 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MIR573-201ENST00000384964 99 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MIR520H-201ENST00000385126 88 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MTCO2P12-201ENST00000427426 682 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 HMGN1P33-201ENST00000432945 451 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 AC020891.4-201ENST00000605745 93 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MIR8055-201ENST00000610739 97 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MIR6740-201ENST00000618268 113 ntBASIC0.42□□□□□ -2.34
RFX4Q33E94 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
RFX4Q33E94 UBE2WP1-201ENST00000362030 340 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 Y_RNA.24-201ENST00000362508 103 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 Y_RNA.122-201ENST00000363331 96 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 Y_RNA.229-201ENST00000364347 113 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 SNORA36.2-201ENST00000384004 127 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 RNU6-211P-201ENST00000384047 107 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 RNU6-177P-201ENST00000411257 104 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 AC087499.4-201ENST00000448505 178 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 RNU7-73P-201ENST00000458743 63 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 RNU7-62P-201ENST00000458856 62 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 SERF1AP1-201ENST00000514575 187 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 RNU6-693P-201ENST00000516134 107 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 RNU6-1270P-201ENST00000517128 108 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 MIR4804-201ENST00000581683 73 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms