Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 RNA5SP457-201ENST00000363657 124 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-326P-201ENST00000365480 107 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 MIR548O-201ENST00000408583 114 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.701-201ENST00000516812 110 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 AC010487.4-201ENST00000637027 61 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 AL589743.1-201ENST00000551932 2712 ntBASIC0.72□□□□□ -2.29
SHROOM1Q2M3G4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.84-201ENST00000363011 104 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.512-201ENST00000384518 102 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-205P-201ENST00000390858 107 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.587-201ENST00000391210 103 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 RPS26P5-201ENST00000418544 335 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 SNORA27.4-201ENST00000516650 95 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 AC243994.1-201ENST00000618627 109 ntBASIC0.71□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.202-201ENST00000364083 110 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 SNORD113.3-201ENST00000364630 78 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.276-201ENST00000364732 109 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.486-201ENST00000384398 107 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 snoU13.21-201ENST00000459368 105 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 RNA5SP121-201ENST00000516537 101 ntBASIC0.7□□□□□ -2.3
SHROOM1Q2M3G4 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.152-201ENST00000363578 100 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.217-201ENST00000364214 105 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 SNORA1.2-201ENST00000365189 134 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-396P-201ENST00000365369 105 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 AC015818.7-201ENST00000428754 109 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 MTCYBP6-201ENST00000441810 138 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 AC087499.7-201ENST00000441958 109 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 AC067940.1-201ENST00000458411 300 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.641-201ENST00000459414 105 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-1338P-201ENST00000516328 91 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 RNU11-2P-201ENST00000516898 142 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 AC006006.1-201ENST00000603082 144 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 AL021707.8-201ENST00000609428 183 ntBASIC0.69□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-211P-201ENST00000384047 107 ntBASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-847P-201ENST00000411115 108 ntBASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 AC113618.1-201ENST00000416747 285 ntBASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 AC090844.1-201ENST00000422019 156 ntBASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 RNU7-67P-201ENST00000459003 62 ntBASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-958P-201ENST00000516995 106 ntBASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 AC007751.1-201ENST00000529260 376 ntBASIC0.68□□□□□ -2.3
SHROOM1Q2M3G4 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 SNORA33.2-201ENST00000365413 134 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-1289P-201ENST00000384431 106 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-125P-201ENST00000384505 107 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNA5SP496-201ENST00000391240 109 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-985P-201ENST00000410182 104 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-651P-201ENST00000411040 105 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 U7.7-201ENST00000459276 60 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 MTATP8P1-201ENST00000467115 207 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 SERF1AP1-201ENST00000514575 187 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 MTCO2P24-201ENST00000515611 426 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 SCARNA8-201ENST00000515924 131 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-693P-201ENST00000516134 107 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 MIR2115-201ENST00000516657 100 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-1270P-201ENST00000517128 108 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.802-201ENST00000614892 130 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 MIR924-201ENST00000638017 53 ntBASIC0.67□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-238P-201ENST00000363313 106 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-613P-201ENST00000410412 108 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 RNU6-1203P-201ENST00000410703 110 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 AC092628.1-201ENST00000436250 252 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 AL731563.1-201ENST00000442202 214 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 COX6CP6-201ENST00000490840 228 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 RNU2-13P-201ENST00000515909 113 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 Z83818.1-201ENST00000603584 150 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.66□□□□□ -2.3
SHROOM1Q2M3G4 SNORD45.3-201ENST00000363836 72 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 SNORD115-28-201ENST00000363931 81 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 RNU6-639P-201ENST00000384074 107 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 MT-TT-201ENST00000387460 66 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 SNORD83.1-201ENST00000411362 77 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 MTND4LP30-201ENST00000454092 297 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 AC107297.1-201ENST00000459991 176 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 AC113410.1-201ENST00000505029 247 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 RNU6-1143P-201ENST00000516125 104 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 SNORD77.4-201ENST00000516158 81 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 AC134878.1-201ENST00000619901 243 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
SHROOM1Q2M3G4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms