Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ROM1Q03395 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
ROM1Q03395 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ROM1Q03395 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.92□□□□□ -2.1
ROM1Q03395 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
ROM1Q03395 SNORA5B-201ENST00000363786 132 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 MIRLET7F2-201ENST00000385277 83 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 AL035398.1-201ENST00000430869 322 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 UBL5P3-201ENST00000475112 231 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 AC090255.1-201ENST00000495779 349 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 RNU2-13P-201ENST00000515909 113 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 RNU6-958P-201ENST00000516995 106 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 MTND5P34-201ENST00000568888 325 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 U6.95-201ENST00000636931 70 ntBASIC1.92□□□□□ -2.1
ROM1Q03395 AP000648.3-201ENST00000623539 4507 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 SNORA70.7-201ENST00000384159 133 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 SNORD20-201ENST00000384550 80 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 MIR653-201ENST00000385279 96 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 RPS29P29-201ENST00000456396 171 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 RNU7-45P-201ENST00000459460 63 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 AC021443.1-201ENST00000604478 211 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 MIR4791-201ENST00000607666 84 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 AC243994.1-201ENST00000618627 109 ntBASIC1.91□□□□□ -2.1
ROM1Q03395 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ROM1Q03395 MTND5P18-201ENST00000445624 1801 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 RNU6-1056P-201ENST00000383996 107 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 RNU6-1064P-201ENST00000410626 104 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 RNU6-322P-201ENST00000516010 103 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 RNA5SP281-201ENST00000516504 135 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.9□□□□□ -2.11
ROM1Q03395 AC015688.6-201ENST00000577737 104 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 MIR3162-201ENST00000581818 82 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
ROM1Q03395 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.9□□□□□ -2.11
ROM1Q03395 RNU6-834P-201ENST00000362367 110 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 SNORA24-201ENST00000384096 131 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 Y_RNA.528-201ENST00000384575 108 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 RNU6-476P-201ENST00000384726 107 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 MIR483-201ENST00000385070 76 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 RNU7-43P-201ENST00000516554 64 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 RNY4P20-201ENST00000516678 93 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 RNU6-922P-201ENST00000516753 99 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 MIR4764-201ENST00000580680 88 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ROM1Q03395 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
ROM1Q03395 Y_RNA.346-201ENST00000365385 112 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 RNU6-429P-201ENST00000384582 108 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 MIR520C-201ENST00000385005 87 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 SNORA11.1-201ENST00000408133 129 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 RPL23AP83-201ENST00000434984 473 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 RNU7-53P-201ENST00000516705 60 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 SNORD53-201ENST00000579969 78 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 AL670379.3-201ENST00000605040 251 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 MIR6129-201ENST00000616087 109 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 AL121890.5-201ENST00000620848 304 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 MIR8063-201ENST00000621930 81 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 AC021613.1-201ENST00000623880 111 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 AL391516.1-201ENST00000554380 2449 ntBASIC1.88□□□□□ -2.11
ROM1Q03395 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
ROM1Q03395 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ROM1Q03395 RNU6-1325P-201ENST00000364905 105 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNU6-215P-201ENST00000365169 102 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNU6-1144P-201ENST00000384247 104 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 SNORA51.10-201ENST00000384418 136 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 Y_RNA.537-201ENST00000384626 109 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNU6-1067P-201ENST00000384752 107 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 MIR548A3-201ENST00000385297 97 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 SNORD41-201ENST00000386967 70 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNU6-913P-201ENST00000390913 95 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNU6-1190P-201ENST00000410811 104 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNA5SP136-201ENST00000410906 107 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNU6-717P-201ENST00000459076 104 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RNU7-164P-201ENST00000459221 62 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 MIR4305-201ENST00000583252 102 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 AC008133.2-201ENST00000624540 351 ntBASIC1.87□□□□□ -2.11
ROM1Q03395 Y_RNA.298-201ENST00000364960 107 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 RNU6-301P-201ENST00000384277 107 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 AL023284.1-201ENST00000403956 276 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.86□□□□□ -2.11
ROM1Q03395 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 RPS27P21-201ENST00000486977 252 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.86□□□□□ -2.11
ROM1Q03395 RNU7-123P-201ENST00000515911 60 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 RNU2-35P-201ENST00000516446 142 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
ROM1Q03395 AP000553.5-201ENST00000641933 54 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms