Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 AC125232.2-201ENST00000592457 143 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AL391834.2-201ENST00000609982 546 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL7A1Q02388 SEPT14P19-203ENST00000633205 211 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNY4P34-201ENST00000364779 95 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-480P-201ENST00000384332 107 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 MIR599-201ENST00000385069 95 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU2-9P-201ENST00000410194 145 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU2-72P-201ENST00000411175 163 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.21□□□□□ -2.44
COL7A1Q02388 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU7-187P-201ENST00000458985 68 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU7-96P-201ENST00000459535 64 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC091179.3-201ENST00000474761 144 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL7A1Q02388 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-559P-201ENST00000516151 98 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC134698.4-201ENST00000523451 826 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 MIR3915-201ENST00000578518 97 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC122108.2-201ENST00000611946 526 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AL512506.1-201ENST00000613918 449 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC091931.1-201ENST00000623488 728 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 MIR101-2-201ENST00000362195 79 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-509P-201ENST00000363519 107 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-454P-201ENST00000364292 107 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 SNORD116.1-201ENST00000365628 92 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-790P-201ENST00000384479 105 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 SNORA72.6-201ENST00000384520 129 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 SNORD38B-201ENST00000384690 67 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 MT-TH-201ENST00000387441 69 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 SNORA75.4-201ENST00000391278 119 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 MTCYBP36-201ENST00000404146 440 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 POLR2KP2-201ENST00000438155 177 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AP000533.3-201ENST00000447704 118 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 FCF1P4-201ENST00000448326 183 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 U8.19-201ENST00000459095 133 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU7-74P-201ENST00000459104 62 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-469P-201ENST00000516253 101 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-864P-201ENST00000516256 108 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNA5SP33-201ENST00000516687 98 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 RNU6-180P-201ENST00000516697 61 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 SCOCP1-201ENST00000554676 349 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC018638.8-201ENST00000588755 281 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC174048.1-201ENST00000603389 144 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AL357078.3-201ENST00000607528 618 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 MIR6507-201ENST00000613630 70 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 MIR6717-201ENST00000622747 73 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 AC006927.3-201ENST00000638789 384 ntBASIC-0.21□□□□□ -2.44
COL7A1Q02388 SNORD115-25-201ENST00000362619 82 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU6-99P-201ENST00000364721 107 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU6-905P-201ENST00000384434 107 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 MIRLET7B-201ENST00000385140 83 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 SNORD115-47-201ENST00000391226 86 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 MIR548F5-201ENST00000408421 86 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU4-83P-201ENST00000410863 133 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 MTND3P9-201ENST00000429526 346 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 AC010655.3-201ENST00000478818 450 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNA5SP401-201ENST00000515920 127 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 SNORA25.10-201ENST00000515926 124 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU6-189P-201ENST00000516120 101 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU7-53P-201ENST00000516705 60 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNA5SP47-201ENST00000517230 109 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 MTATP6P15-201ENST00000527233 835 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL7A1Q02388 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL7A1Q02388 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL7A1Q02388 MIR548H5-201ENST00000580314 60 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 MIR548AB-201ENST00000584917 84 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 AC008507.4-201ENST00000585464 127 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU6-86P-201ENST00000606534 107 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 AC109347.2-201ENST00000610220 349 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 AC091304.10-201ENST00000641554 121 ntBASIC-0.22□□□□□ -2.44
COL7A1Q02388 RNU6-268P-201ENST00000364174 107 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 RNU6-818P-201ENST00000364837 108 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 RNU2-29P-201ENST00000410423 189 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 SNORD12B-201ENST00000410433 91 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.22□□□□□ -2.45
COL7A1Q02388 BX295541.1-201ENST00000417774 250 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 AC084290.1-201ENST00000434995 374 ntBASIC-0.22□□□□□ -2.45
COL7A1Q02388 USP9YP12-201ENST00000450481 570 ntBASIC-0.22□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms