Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
IRF9Q00978 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
IRF9Q00978 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 RNU6-235P-201ENST00000362644 107 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 RNU6-647P-201ENST00000364243 107 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 RNA5SP259-201ENST00000365541 109 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.01□□□□□ -2.09
IRF9Q00978 RNU7-80P-201ENST00000459562 61 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 RNU6-113P-201ENST00000516653 101 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 AC090049.2-201ENST00000550377 109 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
IRF9Q00978 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
IRF9Q00978 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
IRF9Q00978 Y_RNA.261-201ENST00000364631 102 ntBASIC2□□□□□ -2.09
IRF9Q00978 Y_RNA.351-201ENST00000365436 96 ntBASIC2□□□□□ -2.09
IRF9Q00978 Y_RNA.370-201ENST00000365589 108 ntBASIC2□□□□□ -2.09
IRF9Q00978 Y_RNA.454-201ENST00000384224 113 ntBASIC2□□□□□ -2.09
IRF9Q00978 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
IRF9Q00978 Y_RNA.494-201ENST00000384432 111 ntBASIC2□□□□□ -2.09
IRF9Q00978 SNORA22C-201ENST00000384614 134 ntBASIC2□□□□□ -2.09
IRF9Q00978 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
IRF9Q00978 AC107297.1-201ENST00000459991 176 ntBASIC2□□□□□ -2.09
IRF9Q00978 RPS29P24-201ENST00000486345 171 ntBASIC2□□□□□ -2.09
IRF9Q00978 IGKV3-31-201ENST00000523109 329 ntBASIC2□□□□□ -2.09
IRF9Q00978 MIR3124-201ENST00000582636 67 ntBASIC2□□□□□ -2.09
IRF9Q00978 AC103810.8-201ENST00000607347 118 ntBASIC2□□□□□ -2.09
IRF9Q00978 MIR6715A-201ENST00000615929 79 ntBASIC2□□□□□ -2.09
IRF9Q00978 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
IRF9Q00978 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.99□□□□□ -2.09
IRF9Q00978 RNU1-133P-201ENST00000364867 167 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 AL356379.1-201ENST00000414105 126 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 MTATP6P29-201ENST00000415057 132 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
IRF9Q00978 RNU7-107P-201ENST00000459121 61 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 RNU7-96P-201ENST00000459535 64 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 AC079804.2-201ENST00000490376 200 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 RN7SKP179-201ENST00000516126 217 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 RNU6-659P-201ENST00000516454 104 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 SNORA74.3-201ENST00000517108 154 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 SNORA77B-201ENST00000578179 125 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.99□□□□□ -2.09
IRF9Q00978 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
IRF9Q00978 MIR653-201ENST00000385279 96 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 SNORD28B-201ENST00000390993 75 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 SNX2P2-201ENST00000424553 323 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 RNU6-998P-201ENST00000515894 101 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
IRF9Q00978 MIR1273D-201ENST00000577266 86 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 AC015688.6-201ENST00000577737 104 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
IRF9Q00978 MIR548AR-201ENST00000582191 57 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 AC104984.5-201ENST00000586878 94 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 AL627230.6-201ENST00000611129 280 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 AC091932.4-201ENST00000623386 200 ntBASIC1.98□□□□□ -2.09
IRF9Q00978 AC131280.1-202ENST00000624067 4211 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 MIR342-201ENST00000362212 99 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 RNU6-322P-201ENST00000516010 103 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 RNU6-772P-201ENST00000516042 105 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 MIR4648-201ENST00000580107 72 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 AC108081.1-201ENST00000604358 221 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.97□□□□□ -2.09
IRF9Q00978 AL596211.1-201ENST00000569873 2277 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
IRF9Q00978 RNU6-1290P-201ENST00000362957 109 ntBASIC1.96□□□□□ -2.1
IRF9Q00978 RNA5SP205-201ENST00000364653 136 ntBASIC1.96□□□□□ -2.1
IRF9Q00978 SNORA70.7-201ENST00000384159 133 ntBASIC1.96□□□□□ -2.1
IRF9Q00978 RNY1P6-201ENST00000384193 109 ntBASIC1.96□□□□□ -2.1
IRF9Q00978 Y_RNA.617-201ENST00000410920 90 ntBASIC1.96□□□□□ -2.1
IRF9Q00978 RNU2-13P-201ENST00000515909 113 ntBASIC1.96□□□□□ -2.1
IRF9Q00978 RNU6-349P-201ENST00000362402 107 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 Y_RNA.525-201ENST00000384570 113 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 AL451046.2-201ENST00000403074 277 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 AL035398.1-201ENST00000430869 322 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 snoU13.26-201ENST00000459452 105 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.95□□□□□ -2.1
IRF9Q00978 RNU6-1061P-201ENST00000516530 99 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 RNU7-43P-201ENST00000516554 64 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 Y_RNA.712-201ENST00000517011 92 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 AC133485.4-201ENST00000561835 220 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 AC138907.4-201ENST00000570107 226 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
IRF9Q00978 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.95□□□□□ -2.1
IRF9Q00978 RNU6-690P-201ENST00000365242 106 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 SNORA24-201ENST00000384096 131 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 RNU6-1067P-201ENST00000384752 107 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 MIR30A-201ENST00000385092 71 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
IRF9Q00978 RNU6-735P-201ENST00000410612 107 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 HMGN2P23-201ENST00000456759 269 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 RNU2-11P-201ENST00000459191 187 ntBASIC1.94□□□□□ -2.1
IRF9Q00978 UBL5P3-201ENST00000475112 231 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms