Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 SNORA72.6-201ENST00000384520 129 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 MIR626-201ENST00000385032 94 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-192P-201ENST00000391253 100 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.6□□□□□ -2.51
HSPG2P98160 RPL22P17-201ENST00000438729 315 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC097635.1-201ENST00000450678 155 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
HSPG2P98160 AL137161.1-201ENST00000532231 390 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.6□□□□□ -2.51
HSPG2P98160 MIR4473-201ENST00000583731 91 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 MIR3674-201ENST00000636576 68 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 AC099654.12-201ENST00000639868 649 ntBASIC-0.6□□□□□ -2.51
HSPG2P98160 RNU6-653P-201ENST00000363074 106 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 MIR652-201ENST00000385278 98 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 SNORD70.1-201ENST00000391007 85 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 MTCYBP36-201ENST00000404146 440 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNA5SP272-201ENST00000516095 111 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.61□□□□□ -2.51
HSPG2P98160 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU4-75P-201ENST00000364621 146 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU2-61P-201ENST00000411069 191 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.61□□□□□ -2.51
HSPG2P98160 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.61□□□□□ -2.51
HSPG2P98160 snoU13.13-201ENST00000458842 104 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 MIR4520-1-201ENST00000582609 70 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 AC011603.4-201ENST00000611325 277 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU6-540P-201ENST00000384622 101 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 MIR599-201ENST00000385069 95 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 AL031667.1-201ENST00000440222 725 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 AC093423.1-201ENST00000440817 142 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU7-175P-201ENST00000515915 61 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU6-175P-201ENST00000516896 107 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 AC008507.4-201ENST00000585464 127 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNA5SP403-201ENST00000363598 108 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU6-169P-201ENST00000365336 107 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 SNORA49-201ENST00000386157 136 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
HSPG2P98160 RNU6-721P-201ENST00000410155 105 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.61□□□□□ -2.51
HSPG2P98160 Z82188.1-201ENST00000436709 154 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 TUSC7.1-201ENST00000610969 165 ntBASIC-0.61□□□□□ -2.51
HSPG2P98160 SNORD114-17-201ENST00000364699 75 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-108P-201ENST00000365558 107 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-831P-201ENST00000384548 107 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 AL354751.2-201ENST00000415471 210 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU7-149P-201ENST00000516739 59 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 AP003181.2-201ENST00000528941 181 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 MIR6717-201ENST00000622747 73 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 SNORD18.1-201ENST00000363807 70 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 MIRLET7B-201ENST00000385140 83 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 TPTE2P5-203ENST00000458118 728 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU7-96P-201ENST00000459535 64 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-410P-201ENST00000517006 107 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.62□□□□□ -2.51
HSPG2P98160 AC008507.2-201ENST00000588402 1176 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 AC027807.2-201ENST00000616099 408 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 AC069503.3-201ENST00000618674 145 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 AC006927.2-201ENST00000639256 389 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-553P-201ENST00000364047 96 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 MT-TM-201ENST00000387377 68 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
HSPG2P98160 MIR5704-201ENST00000584029 77 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 AC022441.3-201ENST00000605737 136 ntBASIC-0.62□□□□□ -2.51
HSPG2P98160 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 RNY1P13-201ENST00000365030 105 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 AC092954.2-201ENST00000609103 430 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 MIR342-201ENST00000362212 99 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 RNU6-413P-201ENST00000384115 107 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 SNORA26.6-201ENST00000391256 115 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 AC108059.2-201ENST00000434626 151 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 AC145350.1-201ENST00000567426 208 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 AC007494.3-201ENST00000624660 743 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 SNORD115-27-201ENST00000364430 82 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 RNA5SP86-201ENST00000390869 98 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 MIR548H1-201ENST00000408610 102 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 RNU6-693P-201ENST00000516134 107 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.63□□□□□ -2.51
HSPG2P98160 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.63□□□□□ -2.51
HSPG2P98160 AC092807.2-201ENST00000609367 243 ntBASIC-0.63□□□□□ -2.51
HSPG2P98160 AC104010.1-201ENST00000616889 150 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms