Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
SRP54P61011 Y_RNA.637-201ENST00000459424 114 ntBASIC0.47□□□□□ -2.33
SRP54P61011 RNU6-977P-201ENST00000516411 103 ntBASIC0.47□□□□□ -2.33
SRP54P61011 RNU6-897P-201ENST00000517135 105 ntBASIC0.47□□□□□ -2.33
SRP54P61011 Y_RNA.721-201ENST00000517207 102 ntBASIC0.47□□□□□ -2.33
SRP54P61011 RAC1P9-201ENST00000604990 392 ntBASIC0.47□□□□□ -2.33
SRP54P61011 AC134878.1-201ENST00000619901 243 ntBASIC0.47□□□□□ -2.33
SRP54P61011 AL589743.1-201ENST00000551932 2712 ntBASIC0.47□□□□□ -2.33
SRP54P61011 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SRP54P61011 RNU6-1272P-201ENST00000362776 107 ntBASIC0.46□□□□□ -2.34
SRP54P61011 RNU6-290P-201ENST00000365212 101 ntBASIC0.46□□□□□ -2.34
SRP54P61011 MIR520F-201ENST00000384824 87 ntBASIC0.46□□□□□ -2.34
SRP54P61011 MIR520H-201ENST00000385126 88 ntBASIC0.46□□□□□ -2.34
SRP54P61011 MIR1252-201ENST00000408861 65 ntBASIC0.46□□□□□ -2.34
SRP54P61011 RNU6-383P-201ENST00000410864 94 ntBASIC0.46□□□□□ -2.34
SRP54P61011 RNU7-67P-201ENST00000459003 62 ntBASIC0.46□□□□□ -2.34
SRP54P61011 snoU13.21-201ENST00000459368 105 ntBASIC0.46□□□□□ -2.34
SRP54P61011 RNU6-126P-201ENST00000516685 103 ntBASIC0.46□□□□□ -2.34
SRP54P61011 MIR4724-201ENST00000579485 89 ntBASIC0.46□□□□□ -2.34
SRP54P61011 LARP7P1-201ENST00000605576 316 ntBASIC0.46□□□□□ -2.34
SRP54P61011 SNORD115-28-201ENST00000363931 81 ntBASIC0.45□□□□□ -2.34
SRP54P61011 RNU6-823P-201ENST00000391042 103 ntBASIC0.45□□□□□ -2.34
SRP54P61011 Y_RNA.645-201ENST00000391229 102 ntBASIC0.45□□□□□ -2.34
SRP54P61011 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.45□□□□□ -2.34
SRP54P61011 SNORD83.1-201ENST00000411362 77 ntBASIC0.45□□□□□ -2.34
SRP54P61011 AC022028.1-201ENST00000412054 408 ntBASIC0.45□□□□□ -2.34
SRP54P61011 RNU7-73P-201ENST00000458743 63 ntBASIC0.45□□□□□ -2.34
SRP54P61011 SNORD77.4-201ENST00000516158 81 ntBASIC0.45□□□□□ -2.34
SRP54P61011 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.45□□□□□ -2.34
SRP54P61011 MIR4771-2-201ENST00000577758 74 ntBASIC0.45□□□□□ -2.34
SRP54P61011 MIR5692C2-201ENST00000577959 77 ntBASIC0.45□□□□□ -2.34
SRP54P61011 MIR4771-1-201ENST00000582617 74 ntBASIC0.45□□□□□ -2.34
SRP54P61011 AL049861.1-201ENST00000603130 150 ntBASIC0.45□□□□□ -2.34
SRP54P61011 AP000942.4-201ENST00000604811 241 ntBASIC0.45□□□□□ -2.34
SRP54P61011 RNU6-101P-201ENST00000410323 104 ntBASIC0.44□□□□□ -2.34
SRP54P61011 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.44□□□□□ -2.34
SRP54P61011 RNU7-62P-201ENST00000458856 62 ntBASIC0.44□□□□□ -2.34
SRP54P61011 Y_RNA.666-201ENST00000516187 112 ntBASIC0.44□□□□□ -2.34
SRP54P61011 RNU2-31P-201ENST00000516954 155 ntBASIC0.44□□□□□ -2.34
SRP54P61011 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.44□□□□□ -2.34
SRP54P61011 AC037487.3-201ENST00000606668 112 ntBASIC0.44□□□□□ -2.34
SRP54P61011 MIR6779-201ENST00000617283 64 ntBASIC0.44□□□□□ -2.34
SRP54P61011 MIR369-201ENST00000362155 70 ntBASIC0.43□□□□□ -2.34
SRP54P61011 RNU6-326P-201ENST00000365480 107 ntBASIC0.43□□□□□ -2.34
SRP54P61011 RNY1P8-201ENST00000383970 114 ntBASIC0.43□□□□□ -2.34
SRP54P61011 RNU6-514P-201ENST00000384208 107 ntBASIC0.43□□□□□ -2.34
SRP54P61011 SNORA40.5-201ENST00000391061 128 ntBASIC0.43□□□□□ -2.34
SRP54P61011 SNORA53-201ENST00000391141 249 ntBASIC0.43□□□□□ -2.34
SRP54P61011 Y_RNA.587-201ENST00000391210 103 ntBASIC0.43□□□□□ -2.34
SRP54P61011 AC090844.1-201ENST00000422019 156 ntBASIC0.43□□□□□ -2.34
SRP54P61011 RNU7-53P-201ENST00000516705 60 ntBASIC0.43□□□□□ -2.34
SRP54P61011 AC007751.1-201ENST00000529260 376 ntBASIC0.43□□□□□ -2.34
SRP54P61011 MIR5688-201ENST00000580619 83 ntBASIC0.43□□□□□ -2.34
SRP54P61011 MIR4804-201ENST00000581683 73 ntBASIC0.43□□□□□ -2.34
SRP54P61011 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
SRP54P61011 AC010487.4-201ENST00000637027 61 ntBASIC0.43□□□□□ -2.34
SRP54P61011 SNORA25.1-201ENST00000362326 128 ntBASIC0.42□□□□□ -2.34
SRP54P61011 Y_RNA.205-201ENST00000364128 113 ntBASIC0.42□□□□□ -2.34
SRP54P61011 Y_RNA.380-201ENST00000365663 111 ntBASIC0.42□□□□□ -2.34
SRP54P61011 SNORD24-201ENST00000383884 75 ntBASIC0.42□□□□□ -2.34
SRP54P61011 Y_RNA.494-201ENST00000384432 111 ntBASIC0.42□□□□□ -2.34
SRP54P61011 MIR526A2-201ENST00000390198 65 ntBASIC0.42□□□□□ -2.34
SRP54P61011 PMCHL1-202ENST00000423102 261 ntBASIC0.42□□□□□ -2.34
SRP54P61011 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
SRP54P61011 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.42□□□□□ -2.34
SRP54P61011 AC091959.1-201ENST00000495857 238 ntBASIC0.42□□□□□ -2.34
SRP54P61011 SNORA18.4-201ENST00000516440 124 ntBASIC0.42□□□□□ -2.34
SRP54P61011 MIR4676-201ENST00000583078 72 ntBASIC0.42□□□□□ -2.34
SRP54P61011 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
SRP54P61011 Z97988.1-201ENST00000637697 135 ntBASIC0.42□□□□□ -2.34
SRP54P61011 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
SRP54P61011 Y_RNA.31-201ENST00000362574 102 ntBASIC0.41□□□□□ -2.34
SRP54P61011 RNU6-450P-201ENST00000364654 107 ntBASIC0.41□□□□□ -2.34
SRP54P61011 SNORD38B-201ENST00000384690 67 ntBASIC0.41□□□□□ -2.34
SRP54P61011 MIR193B-201ENST00000384907 83 ntBASIC0.41□□□□□ -2.34
SRP54P61011 MTCO2P12-201ENST00000427426 682 ntBASIC0.41□□□□□ -2.34
SRP54P61011 MTCO2P24-201ENST00000515611 426 ntBASIC0.41□□□□□ -2.34
SRP54P61011 SNORA40.15-201ENST00000516884 107 ntBASIC0.41□□□□□ -2.34
SRP54P61011 RNU6-958P-201ENST00000516995 106 ntBASIC0.41□□□□□ -2.34
SRP54P61011 SNORD38B-202ENST00000625943 69 ntBASIC0.41□□□□□ -2.34
SRP54P61011 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
SRP54P61011 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.4□□□□□ -2.35
SRP54P61011 Y_RNA.28-201ENST00000362554 111 ntBASIC0.4□□□□□ -2.35
SRP54P61011 Y_RNA.293-201ENST00000364908 93 ntBASIC0.4□□□□□ -2.35
SRP54P61011 Y_RNA.389-201ENST00000383924 113 ntBASIC0.4□□□□□ -2.35
SRP54P61011 Y_RNA.486-201ENST00000384398 107 ntBASIC0.4□□□□□ -2.35
SRP54P61011 BTF3P11-201ENST00000426582 477 ntBASIC0.4□□□□□ -2.35
SRP54P61011 MIR18B-201ENST00000454574 71 ntBASIC0.4□□□□□ -2.35
SRP54P61011 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.4□□□□□ -2.35
SRP54P61011 MIR3612-201ENST00000579753 87 ntBASIC0.4□□□□□ -2.35
SRP54P61011 Y_RNA.37-201ENST00000362606 108 ntBASIC0.39□□□□□ -2.35
SRP54P61011 Y_RNA.105-201ENST00000363182 111 ntBASIC0.39□□□□□ -2.35
SRP54P61011 Y_RNA.217-201ENST00000364214 105 ntBASIC0.39□□□□□ -2.35
SRP54P61011 Y_RNA.276-201ENST00000364732 109 ntBASIC0.39□□□□□ -2.35
SRP54P61011 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
SRP54P61011 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
SRP54P61011 SNORA27-201ENST00000384323 126 ntBASIC0.39□□□□□ -2.35
SRP54P61011 MIR518F-201ENST00000384973 87 ntBASIC0.39□□□□□ -2.35
SRP54P61011 RNU6-121P-201ENST00000410525 99 ntBASIC0.39□□□□□ -2.35
SRP54P61011 RNU6-938P-201ENST00000411285 103 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms