Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 MIR5694-201ENST00000581190 76 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 MIR4305-201ENST00000583252 102 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ITGA1P56199 MIR342-201ENST00000362212 99 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 RNU6-833P-201ENST00000363486 107 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 Y_RNA.323-201ENST00000365157 109 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 Y_RNA.328-201ENST00000365208 113 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 SNORA4.2-201ENST00000365313 147 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 RNU6-1014P-201ENST00000383940 103 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 RNU6-756P-201ENST00000383997 107 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 SNORA27-201ENST00000384323 126 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 HMGN2P3-201ENST00000433603 273 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 HMGN2P5-201ENST00000436882 273 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 RNA5SP168-201ENST00000516642 112 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 MIR1273D-201ENST00000577266 86 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 MIR3683-201ENST00000580847 82 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 AC078899.2-201ENST00000595282 212 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 MIR4679-1-201ENST00000637619 75 ntBASIC2.24□□□□□ -2.05
ITGA1P56199 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ITGA1P56199 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-34-201ENST00000362441 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-12-201ENST00000362583 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-29-201ENST00000362834 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-9-201ENST00000362912 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-21-201ENST00000362963 81 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-14-201ENST00000363090 81 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-13-201ENST00000363358 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-41-201ENST00000363608 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-11-201ENST00000363616 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-5-201ENST00000363633 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-39-201ENST00000363694 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-4-201ENST00000363810 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-16-201ENST00000363887 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-6-201ENST00000363942 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-42-201ENST00000364273 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 RNU4-16P-201ENST00000364737 141 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-15-201ENST00000364809 81 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-1-201ENST00000364961 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-26-201ENST00000365067 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-10-201ENST00000365073 81 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-43-201ENST00000365503 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-36-201ENST00000365629 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 MT-TI-201ENST00000387365 69 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 AL035398.1-201ENST00000430869 322 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 RNVU1-2-201ENST00000516326 135 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 AC090821.2-201ENST00000523552 176 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 AC015712.3-201ENST00000559380 164 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.23□□□□□ -2.05
ITGA1P56199 AC006254.2-201ENST00000603259 279 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 SNORD115-40-201ENST00000606510 82 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 RNU6-94P-201ENST00000607728 107 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 MIR203B-201ENST00000636080 86 ntBASIC2.23□□□□□ -2.05
ITGA1P56199 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ITGA1P56199 SNORA51.5-201ENST00000384126 131 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 RNU6-1031P-201ENST00000384773 107 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 MIR1289-2-201ENST00000408360 111 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ITGA1P56199 RNU7-96P-201ENST00000459535 64 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 AC108210.2-201ENST00000503681 201 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 RNU6-998P-201ENST00000515894 101 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 RNU7-12P-201ENST00000516030 62 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 IGLV3-17-201ENST00000519099 244 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 AC022523.2-201ENST00000561045 150 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 HSPE1P19-201ENST00000603327 295 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
ITGA1P56199 RNU6-1104P-201ENST00000384723 104 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 MIR520A-201ENST00000384862 85 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 SNORA48.1-201ENST00000390879 135 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 MIR1267-201ENST00000408723 78 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 RNA5SP270-201ENST00000411361 118 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 AL591806.2-201ENST00000433122 173 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 RNU2-35P-201ENST00000516446 142 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 RNU7-181P-201ENST00000517234 74 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 MIR5582-201ENST00000579697 68 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 MIR3163-201ENST00000581592 73 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
ITGA1P56199 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.2□□□□□ -2.06
ITGA1P56199 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
ITGA1P56199 Y_RNA.494-201ENST00000384432 111 ntBASIC2.2□□□□□ -2.06
ITGA1P56199 MIR548D2-201ENST00000384955 97 ntBASIC2.2□□□□□ -2.06
ITGA1P56199 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ITGA1P56199 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
ITGA1P56199 RNU2-7P-201ENST00000410794 178 ntBASIC2.2□□□□□ -2.06
ITGA1P56199 RNA5SP437-201ENST00000517249 129 ntBASIC2.2□□□□□ -2.06
ITGA1P56199 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
ITGA1P56199 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ITGA1P56199 MIR302B-201ENST00000362188 73 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 SNORD114-1-201ENST00000362705 72 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 U8.6-201ENST00000364939 135 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 Y_RNA.344-201ENST00000365381 112 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 RNU6-1113P-201ENST00000384348 107 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 MIR452-201ENST00000385020 85 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 MIR764-201ENST00000390811 85 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 RNU6-482P-201ENST00000391068 107 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.19□□□□□ -2.06
ITGA1P56199 RNU7-34P-201ENST00000459394 64 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms