Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU7-53P-201ENST00000516705 60 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 IGKV1-22-201ENST00000524313 326 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 MTND5P34-201ENST00000568888 325 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 AC095038.3-201ENST00000634439 195 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 SNORD114-30-201ENST00000364448 72 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 MIRLET7F2-201ENST00000385277 83 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
GFRA1P56159 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 RPS29P29-201ENST00000456396 171 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 SNORD33.1-201ENST00000516213 88 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 RNU6-917P-201ENST00000516294 104 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 MIR3945-201ENST00000581853 98 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 MIR548AR-201ENST00000582191 57 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 AC021443.1-201ENST00000604478 211 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 AL670379.3-201ENST00000605040 251 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 MIR8074-201ENST00000615081 81 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 AL121890.5-201ENST00000620848 304 ntBASIC2.1□□□□□ -2.07
GFRA1P56159 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
GFRA1P56159 RNU6-1144P-201ENST00000384247 104 ntBASIC2.09□□□□□ -2.07
GFRA1P56159 Y_RNA.528-201ENST00000384575 108 ntBASIC2.09□□□□□ -2.07
GFRA1P56159 MIR548A3-201ENST00000385297 97 ntBASIC2.09□□□□□ -2.07
GFRA1P56159 SNORD28B-201ENST00000390993 75 ntBASIC2.09□□□□□ -2.07
GFRA1P56159 SNORA31.11-201ENST00000516528 139 ntBASIC2.09□□□□□ -2.07
GFRA1P56159 RNU7-43P-201ENST00000516554 64 ntBASIC2.09□□□□□ -2.07
GFRA1P56159 RNA5SP402-201ENST00000517148 110 ntBASIC2.09□□□□□ -2.07
GFRA1P56159 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
GFRA1P56159 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
GFRA1P56159 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.08
GFRA1P56159 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
GFRA1P56159 MTND5P18-201ENST00000445624 1801 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 RNU6-1325P-201ENST00000364905 105 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 SNORD20-201ENST00000384550 80 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 AL451046.2-201ENST00000403074 277 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 RNU1-41P-201ENST00000516161 162 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 RNU1-48P-201ENST00000516400 162 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 RNU6-958P-201ENST00000516995 106 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 AC243994.1-201ENST00000618627 109 ntBASIC2.08□□□□□ -2.08
GFRA1P56159 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.08□□□□□ -2.08
GFRA1P56159 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GFRA1P56159 RNU4-16P-201ENST00000364737 141 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 RNU6-215P-201ENST00000365169 102 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 Y_RNA.537-201ENST00000384626 109 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 MIR653-201ENST00000385279 96 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 AL023284.1-201ENST00000403956 276 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 MTATP6P29-201ENST00000415057 132 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 RNU2-13P-201ENST00000515909 113 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
GFRA1P56159 MIR4791-201ENST00000607666 84 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
GFRA1P56159 AL137847.3-201ENST00000611521 109 ntBASIC2.07□□□□□ -2.08
GFRA1P56159 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GFRA1P56159 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
GFRA1P56159 SNORA24-201ENST00000384096 131 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 SNORA51.10-201ENST00000384418 136 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 RNU7-164P-201ENST00000459221 62 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 COX6CP6-201ENST00000490840 228 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.06□□□□□ -2.08
GFRA1P56159 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 RNY4P20-201ENST00000516678 93 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.06□□□□□ -2.08
GFRA1P56159 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 MIR4305-201ENST00000583252 102 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
GFRA1P56159 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
GFRA1P56159 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
GFRA1P56159 MIR570-201ENST00000384917 97 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 MIR520C-201ENST00000385005 87 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 RNA5SP261-201ENST00000410536 106 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
GFRA1P56159 Y_RNA.649-201ENST00000459077 103 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 RNU6-919P-201ENST00000516731 104 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 MIR4764-201ENST00000580680 88 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 MIR6129-201ENST00000616087 109 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 AC021613.1-201ENST00000623880 111 ntBASIC2.05□□□□□ -2.08
GFRA1P56159 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
GFRA1P56159 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
GFRA1P56159 Y_RNA.213-201ENST00000364178 111 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 Y_RNA.298-201ENST00000364960 107 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 SNORA70B-201ENST00000384210 135 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 MIR759-201ENST00000390224 91 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 RNU7-73P-201ENST00000458743 63 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 SNORA44.1-201ENST00000517031 108 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 SNORA77B-201ENST00000578179 125 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 MIR3152-201ENST00000579801 74 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 HSPE1P19-201ENST00000603327 295 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 AC008133.2-201ENST00000624540 351 ntBASIC2.04□□□□□ -2.08
GFRA1P56159 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
GFRA1P56159 RNU6-893P-201ENST00000458841 100 ntBASIC2.03□□□□□ -2.08
GFRA1P56159 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
GFRA1P56159 DNAJC19P9-201ENST00000555084 351 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms