Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU6-165P-201ENST00000517170 99 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 MIR3646-201ENST00000578301 84 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
SUMO3P55854 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SUMO3P55854 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SUMO3P55854 RNU6-768P-201ENST00000384683 107 ntBASIC1.56□□□□□ -2.16
SUMO3P55854 MIR624-201ENST00000385217 97 ntBASIC1.56□□□□□ -2.16
SUMO3P55854 RNA5SP127-201ENST00000411051 133 ntBASIC1.56□□□□□ -2.16
SUMO3P55854 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.56□□□□□ -2.16
SUMO3P55854 SNORA18.4-201ENST00000516440 124 ntBASIC1.56□□□□□ -2.16
SUMO3P55854 SNORD36C-201ENST00000516733 66 ntBASIC1.56□□□□□ -2.16
SUMO3P55854 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
SUMO3P55854 AL096861.1-201ENST00000610899 123 ntBASIC1.56□□□□□ -2.16
SUMO3P55854 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.55□□□□□ -2.16
SUMO3P55854 Y_RNA.580-201ENST00000391004 95 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 SNORA11.2-201ENST00000408318 127 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 AL133373.1-201ENST00000497098 94 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 DNAJC19P2-201ENST00000593340 302 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 AC008133.2-201ENST00000624540 351 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 MIR6844-201ENST00000637122 62 ntBASIC1.55□□□□□ -2.16
SUMO3P55854 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
SUMO3P55854 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
SUMO3P55854 SNORD48-201ENST00000364953 64 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 Y_RNA.440-201ENST00000384120 114 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 Y_RNA.464-201ENST00000384282 110 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 SNORA27-201ENST00000384323 126 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 RNU6-1054P-201ENST00000411293 104 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 RNU7-41P-201ENST00000515917 61 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 AC090821.2-201ENST00000523552 176 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 MIR3683-201ENST00000580847 82 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 MIR5197-201ENST00000583721 112 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 MIR3192-201ENST00000584920 77 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
SUMO3P55854 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
SUMO3P55854 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 SNORA24-201ENST00000384096 131 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 SNORA70.7-201ENST00000384159 133 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 Y_RNA.494-201ENST00000384432 111 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 SNORA75.5-201ENST00000391291 81 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 MIR548I3-201ENST00000408378 149 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 MIR548I1-201ENST00000408810 149 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 AC243994.1-201ENST00000618627 109 ntBASIC1.53□□□□□ -2.16
SUMO3P55854 SNORA51.10-201ENST00000384418 136 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 MIR1289-2-201ENST00000408360 111 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 RPS29P24-201ENST00000486345 171 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 MIR3144-201ENST00000579460 79 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 AC104465.1-201ENST00000611365 139 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 MIR8065-201ENST00000620577 100 ntBASIC1.52□□□□□ -2.17
SUMO3P55854 RNU6-1082P-201ENST00000364574 107 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 RNU6-449P-201ENST00000383914 107 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 MIR570-201ENST00000384917 97 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.51□□□□□ -2.17
SUMO3P55854 RNU7-67P-201ENST00000459003 62 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 RNU7-96P-201ENST00000459535 64 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 MIR4251-201ENST00000635819 61 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 MIR376A2-201ENST00000636782 80 ntBASIC1.51□□□□□ -2.17
SUMO3P55854 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SUMO3P55854 MT-TR-201ENST00000387439 65 ntBASIC1.5□□□□□ -2.17
SUMO3P55854 RNU7-80P-201ENST00000459562 61 ntBASIC1.5□□□□□ -2.17
SUMO3P55854 RNU6-1212P-201ENST00000517023 104 ntBASIC1.5□□□□□ -2.17
SUMO3P55854 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.5□□□□□ -2.17
SUMO3P55854 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SUMO3P55854 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SUMO3P55854 RNU6-818P-201ENST00000364837 108 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 RNU6-209P-201ENST00000384118 107 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 RNU6-804P-201ENST00000384286 107 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 MIR504-201ENST00000385065 83 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 SNORD37.2-201ENST00000391075 66 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 AL035398.1-201ENST00000430869 322 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 AC245047.7-201ENST00000440265 293 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 snoU13.16-201ENST00000459350 104 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 RNU6-998P-201ENST00000515894 101 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 MTND1P7-201ENST00000632801 297 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 MIR3658-201ENST00000636291 56 ntBASIC1.49□□□□□ -2.17
SUMO3P55854 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SUMO3P55854 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SUMO3P55854 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SUMO3P55854 Y_RNA.351-201ENST00000365436 96 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 Y_RNA.454-201ENST00000384224 113 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 RNU6-588P-201ENST00000410281 105 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.48□□□□□ -2.17
SUMO3P55854 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.48□□□□□ -2.17
SUMO3P55854 RNU7-73P-201ENST00000458743 63 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 snoU13.25-201ENST00000458945 104 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 RNU7-53P-201ENST00000516705 60 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 RNU6-958P-201ENST00000516995 106 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
SUMO3P55854 AC131055.1-201ENST00000584626 316 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 PRELID3BP2-201ENST00000605362 201 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 Y_RNA.778-201ENST00000620203 90 ntBASIC1.48□□□□□ -2.17
SUMO3P55854 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms