Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 RNU7-104P-201ENST00000459398 79 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 AC091951.2-201ENST00000500762 203 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 RNU7-149P-201ENST00000516739 59 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 AC141846.1-201ENST00000568348 142 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 AC005014.3-201ENST00000605985 190 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 AC011476.5-201ENST00000615594 130 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 MIR6717-201ENST00000622747 73 ntBASIC-0.59□□□□□ -2.5
FOXA3P55318 MIR101-1-201ENST00000362265 75 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU6-674P-201ENST00000363831 107 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU6-483P-201ENST00000384088 108 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 MIR625-201ENST00000385047 85 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU6-780P-201ENST00000391030 104 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 MTND4P28-201ENST00000426217 387 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 MTND2P22-201ENST00000444325 1033 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU6-956P-201ENST00000458868 103 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 MIR2053-201ENST00000459295 91 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 AC010424.1-201ENST00000506336 297 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU6-566P-201ENST00000516790 107 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RNU7-161P-201ENST00000517289 62 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 AP003072.1-201ENST00000531740 145 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 DEFB131E-201ENST00000532329 154 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 MTND3P12-201ENST00000559068 328 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 DEFB117-201ENST00000602356 141 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 AC022441.3-201ENST00000605737 136 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 AL050303.3-201ENST00000613704 284 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 RN7SL660P-201ENST00000614852 299 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 AC022140.2-201ENST00000623500 188 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.6□□□□□ -2.51
FOXA3P55318 MIR3662-201ENST00000637030 95 ntBASIC-0.6□□□□□ -2.51
FOXA3P55318 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
FOXA3P55318 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
FOXA3P55318 SNORA26.6-201ENST00000391256 115 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 RNA5SP451-201ENST00000410588 110 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 AC006210.1-201ENST00000424882 111 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 MTATP6P17-201ENST00000431030 672 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.61□□□□□ -2.51
FOXA3P55318 RNU7-141P-201ENST00000459304 62 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 RNU6-693P-201ENST00000516134 107 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 RNU6-531P-201ENST00000516694 104 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 MIR2355-201ENST00000517199 87 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 AC245008.1-201ENST00000608123 476 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 AC092794.2-201ENST00000620933 563 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 AC073869.9-201ENST00000641610 120 ntBASIC-0.61□□□□□ -2.51
FOXA3P55318 RNU4-84P-201ENST00000364200 139 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 SNORA3B-201ENST00000391305 131 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 RNU6-908P-201ENST00000410160 94 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 RNU2-14P-201ENST00000411053 191 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 AC023449.1-201ENST00000454464 154 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 RNU7-96P-201ENST00000459535 64 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 RNU6-998P-201ENST00000515894 101 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 RNU6-864P-201ENST00000516256 108 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 MIR4802-201ENST00000581881 80 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 MIR4493-201ENST00000584016 73 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 MIR4436A-201ENST00000585278 85 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 AC005357.1-201ENST00000588399 301 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 AC119751.7-201ENST00000600494 245 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 AL162413.1-201ENST00000603198 110 ntBASIC-0.62□□□□□ -2.51
FOXA3P55318 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 RNU6-653P-201ENST00000363074 106 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 RNU6-99P-201ENST00000364721 107 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 RNU6-702P-201ENST00000364982 107 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 RNU6-949P-201ENST00000384040 107 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 SNORD115-47-201ENST00000391226 86 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 MTND1P2-201ENST00000430604 821 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 MTND4P19-201ENST00000446659 478 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.63□□□□□ -2.51
FOXA3P55318 RN7SKP295-201ENST00000517264 153 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 MIR4790-201ENST00000577799 79 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 MIR3145-201ENST00000580727 82 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 AL356055.1-201ENST00000602528 446 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 AL049861.1-201ENST00000603130 150 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.63□□□□□ -2.51
FOXA3P55318 AC090617.10-201ENST00000624308 134 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
FOXA3P55318 MIR302B-201ENST00000362188 73 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 RNU6-831P-201ENST00000384548 107 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 MIR626-201ENST00000385032 94 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 SNORA69.1-201ENST00000390904 137 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 AC009161.1-201ENST00000417306 376 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 SNORA25.13-201ENST00000516395 103 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 MIR4659A-201ENST00000580269 81 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms