Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-970P-201ENST00000516312 107 ntBASIC1.41□□□□□ -2.18
CDH12P55289 MIR3937-201ENST00000580135 106 ntBASIC1.41□□□□□ -2.18
CDH12P55289 MIR3683-201ENST00000580847 82 ntBASIC1.41□□□□□ -2.18
CDH12P55289 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
CDH12P55289 SNORD33-201ENST00000362761 85 ntBASIC1.4□□□□□ -2.19
CDH12P55289 Y_RNA.241-201ENST00000364470 117 ntBASIC1.4□□□□□ -2.19
CDH12P55289 MIR570-201ENST00000384917 97 ntBASIC1.4□□□□□ -2.19
CDH12P55289 SNORD37.2-201ENST00000391075 66 ntBASIC1.4□□□□□ -2.19
CDH12P55289 SNORA11.2-201ENST00000408318 127 ntBASIC1.4□□□□□ -2.19
CDH12P55289 MIR1289-2-201ENST00000408360 111 ntBASIC1.4□□□□□ -2.19
CDH12P55289 RPS26P48-201ENST00000491713 339 ntBASIC1.4□□□□□ -2.19
CDH12P55289 SNORA18.4-201ENST00000516440 124 ntBASIC1.4□□□□□ -2.19
CDH12P55289 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH12P55289 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
CDH12P55289 MIR5197-201ENST00000583721 112 ntBASIC1.4□□□□□ -2.19
CDH12P55289 GHRLOS.1-201ENST00000610995 70 ntBASIC1.4□□□□□ -2.19
CDH12P55289 MTND1P7-201ENST00000632801 297 ntBASIC1.4□□□□□ -2.19
CDH12P55289 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
CDH12P55289 Y_RNA.370-201ENST00000365589 108 ntBASIC1.39□□□□□ -2.19
CDH12P55289 Y_RNA.400-201ENST00000383963 111 ntBASIC1.39□□□□□ -2.19
CDH12P55289 Y_RNA.440-201ENST00000384120 114 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RN7SL429P-201ENST00000479090 223 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RN7SL489P-201ENST00000486185 223 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RN7SL327P-201ENST00000488659 223 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RNA5SP445-201ENST00000515889 115 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RNU2-13P-201ENST00000515909 113 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RNU6-346P-201ENST00000516288 111 ntBASIC1.39□□□□□ -2.19
CDH12P55289 SNORD111.1-201ENST00000516421 86 ntBASIC1.39□□□□□ -2.19
CDH12P55289 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.39□□□□□ -2.19
CDH12P55289 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
CDH12P55289 AC112693.2-201ENST00000556538 232 ntBASIC1.39□□□□□ -2.19
CDH12P55289 MIR4764-201ENST00000580680 88 ntBASIC1.39□□□□□ -2.19
CDH12P55289 RN7SL853P-201ENST00000617250 223 ntBASIC1.39□□□□□ -2.19
CDH12P55289 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.39□□□□□ -2.19
CDH12P55289 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH12P55289 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-34-201ENST00000362441 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-12-201ENST00000362583 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-29-201ENST00000362834 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-9-201ENST00000362912 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-21-201ENST00000362963 81 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-14-201ENST00000363090 81 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-13-201ENST00000363358 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-41-201ENST00000363608 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-11-201ENST00000363616 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-5-201ENST00000363633 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-39-201ENST00000363694 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-4-201ENST00000363810 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-16-201ENST00000363887 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-6-201ENST00000363942 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-42-201ENST00000364273 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 Y_RNA.251-201ENST00000364551 99 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-15-201ENST00000364809 81 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-1-201ENST00000364961 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-26-201ENST00000365067 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-10-201ENST00000365073 81 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORA1.2-201ENST00000365189 134 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-43-201ENST00000365503 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-36-201ENST00000365629 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 Y_RNA.497-201ENST00000384447 98 ntBASIC1.38□□□□□ -2.19
CDH12P55289 RNU6-1065P-201ENST00000384513 106 ntBASIC1.38□□□□□ -2.19
CDH12P55289 MIR520C-201ENST00000385005 87 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORA40.5-201ENST00000391061 128 ntBASIC1.38□□□□□ -2.19
CDH12P55289 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
CDH12P55289 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH12P55289 AC245517.4-201ENST00000448601 281 ntBASIC1.38□□□□□ -2.19
CDH12P55289 RNU7-197P-201ENST00000458836 62 ntBASIC1.38□□□□□ -2.19
CDH12P55289 RNU7-41P-201ENST00000515917 61 ntBASIC1.38□□□□□ -2.19
CDH12P55289 RNU7-43P-201ENST00000516554 64 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SCARNA15-202ENST00000516881 127 ntBASIC1.38□□□□□ -2.19
CDH12P55289 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
CDH12P55289 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
CDH12P55289 MIR3664-201ENST00000579074 99 ntBASIC1.38□□□□□ -2.19
CDH12P55289 MIR3192-201ENST00000584920 77 ntBASIC1.38□□□□□ -2.19
CDH12P55289 SNORD115-40-201ENST00000606510 82 ntBASIC1.38□□□□□ -2.19
CDH12P55289 AL096861.1-201ENST00000610899 123 ntBASIC1.38□□□□□ -2.19
CDH12P55289 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.38□□□□□ -2.19
CDH12P55289 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.38□□□□□ -2.19
CDH12P55289 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDH12P55289 Y_RNA.52-201ENST00000362760 96 ntBASIC1.37□□□□□ -2.19
CDH12P55289 RNU6-774P-201ENST00000363238 107 ntBASIC1.37□□□□□ -2.19
CDH12P55289 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
CDH12P55289 Y_RNA.215-201ENST00000364204 112 ntBASIC1.37□□□□□ -2.19
CDH12P55289 SNORA27-201ENST00000384323 126 ntBASIC1.37□□□□□ -2.19
CDH12P55289 RNU6-125P-201ENST00000384505 107 ntBASIC1.37□□□□□ -2.19
CDH12P55289 snoU13.25-201ENST00000458945 104 ntBASIC1.37□□□□□ -2.19
CDH12P55289 snoU13.26-201ENST00000459452 105 ntBASIC1.37□□□□□ -2.19
CDH12P55289 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
CDH12P55289 MTND5P32-201ENST00000560711 1802 ntBASIC1.36□□□□□ -2.19
CDH12P55289 RNA5SP190-201ENST00000365222 118 ntBASIC1.36□□□□□ -2.19
CDH12P55289 RNY1P5-201ENST00000383890 115 ntBASIC1.36□□□□□ -2.19
CDH12P55289 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
CDH12P55289 MIR569-201ENST00000385228 96 ntBASIC1.36□□□□□ -2.19
CDH12P55289 MIR1261-201ENST00000408659 82 ntBASIC1.36□□□□□ -2.19
CDH12P55289 SNORA25.12-201ENST00000516202 82 ntBASIC1.36□□□□□ -2.19
CDH12P55289 RNU6-1149P-201ENST00000516810 97 ntBASIC1.36□□□□□ -2.19
CDH12P55289 AC131055.1-201ENST00000584626 316 ntBASIC1.36□□□□□ -2.19
CDH12P55289 AL357312.1-201ENST00000603879 298 ntBASIC1.36□□□□□ -2.19
CDH12P55289 MIR4791-201ENST00000607666 84 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms