Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 MIR548G-201ENST00000408442 89 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 UBL5P2-201ENST00000583788 219 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 AC007179.3-201ENST00000604976 235 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 RNU6-90P-201ENST00000606352 106 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNF144AP50876 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RNF144AP50876 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.9□□□□□ -1.94
RNF144AP50876 RNU6-457P-201ENST00000363999 107 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 RNU1-109P-201ENST00000383960 147 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 RNA5SP344-201ENST00000411081 104 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 SPINT5P-201ENST00000448174 155 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 RNU1-98P-201ENST00000458992 160 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 RN7SL863P-201ENST00000462370 296 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 RNU7-35P-201ENST00000517174 62 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 MIR5195-201ENST00000583555 115 ntBASIC2.9□□□□□ -1.95
RNF144AP50876 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RNF144AP50876 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF144AP50876 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF144AP50876 AP006437.1-201ENST00000641440 3685 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
RNF144AP50876 SNORD115-27-201ENST00000364430 82 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 Y_RNA.448-201ENST00000384185 108 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 Y_RNA.537-201ENST00000384626 109 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 RNU11-3P-201ENST00000391111 133 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 RN7SKP220-201ENST00000410611 288 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 RNU6-1086P-201ENST00000410930 100 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 RNA5SP492-201ENST00000411330 114 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 AL161932.1-201ENST00000437408 146 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 Z96811.1-201ENST00000445880 108 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 RN7SL75P-201ENST00000461926 281 ntBASIC2.89□□□□□ -1.95
RNF144AP50876 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF144AP50876 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF144AP50876 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF144AP50876 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF144AP50876 SNORD56.5-201ENST00000364281 72 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 RNU1-91P-201ENST00000364746 163 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 Y_RNA.354-201ENST00000365448 111 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 RNU6-524P-201ENST00000384270 107 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 MIR597-201ENST00000384968 97 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 RNU2-7P-201ENST00000410794 178 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 RNA5SP120-201ENST00000410900 112 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.88□□□□□ -1.95
RNF144AP50876 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF144AP50876 snoU13.16-201ENST00000459350 104 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 SNORD67.1-201ENST00000516618 108 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF144AP50876 MIR5680-201ENST00000577577 84 ntBASIC2.88□□□□□ -1.95
RNF144AP50876 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
RNF144AP50876 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF144AP50876 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF144AP50876 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNF144AP50876 MIR526A1-201ENST00000384897 85 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 RNU6-788P-201ENST00000390967 104 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 SNORA11.1-201ENST00000408133 129 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 RPL31P63-201ENST00000422565 375 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF144AP50876 AC093729.1-201ENST00000513074 128 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 SCARNA16.3-201ENST00000516595 184 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 MIR3126-201ENST00000577443 74 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF144AP50876 MIR8055-201ENST00000610739 97 ntBASIC2.87□□□□□ -1.95
RNF144AP50876 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF144AP50876 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
RNF144AP50876 Y_RNA.333-201ENST00000365274 102 ntBASIC2.86□□□□□ -1.95
RNF144AP50876 MIR519C-201ENST00000385053 87 ntBASIC2.86□□□□□ -1.95
RNF144AP50876 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.86□□□□□ -1.95
RNF144AP50876 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.86□□□□□ -1.95
RNF144AP50876 RNU7-79P-201ENST00000516082 62 ntBASIC2.86□□□□□ -1.95
RNF144AP50876 AC105081.1-201ENST00000617727 106 ntBASIC2.86□□□□□ -1.95
RNF144AP50876 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RNF144AP50876 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RNF144AP50876 RNA5SP138-201ENST00000365098 114 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 SNORD38.2-201ENST00000384470 69 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 RNU6-1321P-201ENST00000390905 107 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 RPL23AP6-201ENST00000446637 472 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 RN7SL20P-201ENST00000488827 297 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 MTND5P40-201ENST00000559945 246 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 MIR4712-201ENST00000583750 82 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 RPL12P50-201ENST00000603116 116 ntBASIC2.85□□□□□ -1.95
RNF144AP50876 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF144AP50876 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
RNF144AP50876 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
RNF144AP50876 SNORD115-37-201ENST00000363768 82 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 MIR520A-201ENST00000384862 85 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 RNU6-613P-201ENST00000410412 108 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 HMGN2P35-201ENST00000412164 270 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 AC234781.5-201ENST00000508429 271 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 AL513043.2-201ENST00000573941 143 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 FAM106DP-201ENST00000586416 501 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 AC021506.2-201ENST00000612354 169 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 MIR8065-201ENST00000620577 100 ntBASIC2.84□□□□□ -1.95
RNF144AP50876 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
RNF144AP50876 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RNF144AP50876 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.84□□□□□ -1.96
RNF144AP50876 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms