Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MTCO1P5-201ENST00000433573 344 ntBASIC0.29□□□□□ -2.36
CASP4P49662 AC087499.7-201ENST00000441958 109 ntBASIC0.29□□□□□ -2.36
CASP4P49662 MTND5P20-201ENST00000448677 143 ntBASIC0.29□□□□□ -2.36
CASP4P49662 MRPS35P2-201ENST00000508242 191 ntBASIC0.29□□□□□ -2.36
CASP4P49662 Y_RNA.666-201ENST00000516187 112 ntBASIC0.29□□□□□ -2.36
CASP4P49662 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
CASP4P49662 Y_RNA.715-201ENST00000517082 110 ntBASIC0.29□□□□□ -2.36
CASP4P49662 AL049861.1-201ENST00000603130 150 ntBASIC0.29□□□□□ -2.36
CASP4P49662 AL162730.1-201ENST00000605734 292 ntBASIC0.29□□□□□ -2.36
CASP4P49662 AC020891.4-201ENST00000605745 93 ntBASIC0.29□□□□□ -2.36
CASP4P49662 SNORD38B-202ENST00000625943 69 ntBASIC0.29□□□□□ -2.36
CASP4P49662 AC112487.2-201ENST00000637950 304 ntBASIC0.29□□□□□ -2.36
CASP4P49662 Y_RNA.494-201ENST00000384432 111 ntBASIC0.28□□□□□ -2.36
CASP4P49662 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
CASP4P49662 SNORD115-46-201ENST00000390982 71 ntBASIC0.28□□□□□ -2.36
CASP4P49662 SNORA40.5-201ENST00000391061 128 ntBASIC0.28□□□□□ -2.36
CASP4P49662 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
CASP4P49662 BTF3P11-201ENST00000426582 477 ntBASIC0.28□□□□□ -2.36
CASP4P49662 MIR18B-201ENST00000454574 71 ntBASIC0.28□□□□□ -2.36
CASP4P49662 RNU7-56P-201ENST00000458744 62 ntBASIC0.28□□□□□ -2.36
CASP4P49662 Y_RNA.637-201ENST00000459424 114 ntBASIC0.28□□□□□ -2.36
CASP4P49662 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CASP4P49662 SNORD77.4-201ENST00000516158 81 ntBASIC0.28□□□□□ -2.36
CASP4P49662 RNU6-126P-201ENST00000516685 103 ntBASIC0.28□□□□□ -2.36
CASP4P49662 RNU7-53P-201ENST00000516705 60 ntBASIC0.28□□□□□ -2.36
CASP4P49662 Y_RNA.702-201ENST00000516843 96 ntBASIC0.28□□□□□ -2.36
CASP4P49662 RNU6-958P-201ENST00000516995 106 ntBASIC0.28□□□□□ -2.36
CASP4P49662 MIR4724-201ENST00000579485 89 ntBASIC0.28□□□□□ -2.36
CASP4P49662 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
CASP4P49662 Z97988.1-201ENST00000637697 135 ntBASIC0.28□□□□□ -2.36
CASP4P49662 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CASP4P49662 AL589743.1-201ENST00000551932 2712 ntBASIC0.27□□□□□ -2.37
CASP4P49662 RNU6-1272P-201ENST00000362776 107 ntBASIC0.27□□□□□ -2.37
CASP4P49662 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
CASP4P49662 Y_RNA.395-201ENST00000383945 109 ntBASIC0.27□□□□□ -2.37
CASP4P49662 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CASP4P49662 Y_RNA.581-201ENST00000391017 97 ntBASIC0.27□□□□□ -2.37
CASP4P49662 Y_RNA.587-201ENST00000391210 103 ntBASIC0.27□□□□□ -2.37
CASP4P49662 MTND3P22-201ENST00000510932 243 ntBASIC0.27□□□□□ -2.37
CASP4P49662 AC007751.1-201ENST00000529260 376 ntBASIC0.27□□□□□ -2.37
CASP4P49662 MIR5692C2-201ENST00000577959 77 ntBASIC0.27□□□□□ -2.37
CASP4P49662 uc_338.22-201ENST00000622722 187 ntBASIC0.27□□□□□ -2.37
CASP4P49662 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.26□□□□□ -2.37
CASP4P49662 Y_RNA.118-201ENST00000363300 101 ntBASIC0.26□□□□□ -2.37
CASP4P49662 SNORD24-201ENST00000383884 75 ntBASIC0.26□□□□□ -2.37
CASP4P49662 Y_RNA.639-201ENST00000458981 102 ntBASIC0.26□□□□□ -2.37
CASP4P49662 RNU6-507P-201ENST00000516045 100 ntBASIC0.26□□□□□ -2.37
CASP4P49662 RNU6-397P-201ENST00000516226 104 ntBASIC0.26□□□□□ -2.37
CASP4P49662 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.26□□□□□ -2.37
CASP4P49662 AC124312.5-201ENST00000604451 268 ntBASIC0.26□□□□□ -2.37
CASP4P49662 AL133255.1-201ENST00000606374 441 ntBASIC0.26□□□□□ -2.37
CASP4P49662 MIR8055-201ENST00000610739 97 ntBASIC0.26□□□□□ -2.37
CASP4P49662 MIR6740-201ENST00000618268 113 ntBASIC0.26□□□□□ -2.37
CASP4P49662 AC010332.2-201ENST00000613083 1904 ntBASIC0.25□□□□□ -2.37
CASP4P49662 Y_RNA.37-201ENST00000362606 108 ntBASIC0.25□□□□□ -2.37
CASP4P49662 RNU6-290P-201ENST00000365212 101 ntBASIC0.25□□□□□ -2.37
CASP4P49662 SNORA27-201ENST00000384323 126 ntBASIC0.25□□□□□ -2.37
CASP4P49662 Y_RNA.486-201ENST00000384398 107 ntBASIC0.25□□□□□ -2.37
CASP4P49662 RNU6-913P-201ENST00000390913 95 ntBASIC0.25□□□□□ -2.37
CASP4P49662 SNORD100-201ENST00000408573 76 ntBASIC0.25□□□□□ -2.37
CASP4P49662 RNU6-1165P-201ENST00000410119 107 ntBASIC0.25□□□□□ -2.37
CASP4P49662 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
CASP4P49662 MTND4P19-201ENST00000446659 478 ntBASIC0.25□□□□□ -2.37
CASP4P49662 RPS29P24-201ENST00000486345 171 ntBASIC0.25□□□□□ -2.37
CASP4P49662 MIR548S-201ENST00000581352 82 ntBASIC0.25□□□□□ -2.37
CASP4P49662 MIR4795-201ENST00000584182 89 ntBASIC0.25□□□□□ -2.37
CASP4P49662 uc_338.6-201ENST00000613544 171 ntBASIC0.25□□□□□ -2.37
CASP4P49662 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
CASP4P49662 RNU4-73P-201ENST00000363164 141 ntBASIC0.24□□□□□ -2.37
CASP4P49662 SNORA1.1-201ENST00000364671 133 ntBASIC0.24□□□□□ -2.37
CASP4P49662 RNU6-514P-201ENST00000384208 107 ntBASIC0.24□□□□□ -2.37
CASP4P49662 MIR588-201ENST00000384900 83 ntBASIC0.24□□□□□ -2.37
CASP4P49662 MIR518F-201ENST00000384973 87 ntBASIC0.24□□□□□ -2.37
CASP4P49662 MT-TD-201ENST00000387419 68 ntBASIC0.24□□□□□ -2.37
CASP4P49662 MIR526A2-201ENST00000390198 65 ntBASIC0.24□□□□□ -2.37
CASP4P49662 RNU6-938P-201ENST00000411285 103 ntBASIC0.24□□□□□ -2.37
CASP4P49662 RNU2-31P-201ENST00000516954 155 ntBASIC0.24□□□□□ -2.37
CASP4P49662 RNU6-897P-201ENST00000517135 105 ntBASIC0.24□□□□□ -2.37
CASP4P49662 MIR5688-201ENST00000580619 83 ntBASIC0.24□□□□□ -2.37
CASP4P49662 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
CASP4P49662 RAC1P9-201ENST00000604990 392 ntBASIC0.24□□□□□ -2.37
CASP4P49662 AC037487.3-201ENST00000606668 112 ntBASIC0.24□□□□□ -2.37
CASP4P49662 AC090971.5-201ENST00000621102 293 ntBASIC0.24□□□□□ -2.37
CASP4P49662 SNORA25.1-201ENST00000362326 128 ntBASIC0.23□□□□□ -2.37
CASP4P49662 Y_RNA.293-201ENST00000364908 93 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-364P-201ENST00000384387 107 ntBASIC0.23□□□□□ -2.37
CASP4P49662 MIR125B2-201ENST00000385128 89 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-1319P-201ENST00000390855 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-747P-201ENST00000390928 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 SNORA53-201ENST00000391141 249 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-241P-201ENST00000391148 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 MIR1257-201ENST00000408490 117 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-447P-201ENST00000410293 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-1118P-201ENST00000410382 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
CASP4P49662 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms