Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SNORD115-10-201ENST00000365073 81 ntBASIC0.09□□□□□ -2.4
SSR1P43307 SNORD115-43-201ENST00000365503 82 ntBASIC0.09□□□□□ -2.4
SSR1P43307 SNORD115-36-201ENST00000365629 82 ntBASIC0.09□□□□□ -2.4
SSR1P43307 SNORD63-201ENST00000384262 68 ntBASIC0.09□□□□□ -2.4
SSR1P43307 RNU6-863P-201ENST00000515989 104 ntBASIC0.09□□□□□ -2.4
SSR1P43307 RNU6-1270P-201ENST00000517128 108 ntBASIC0.09□□□□□ -2.4
SSR1P43307 AL355297.3-201ENST00000604082 446 ntBASIC0.09□□□□□ -2.4
SSR1P43307 SNORD115-40-201ENST00000606510 82 ntBASIC0.09□□□□□ -2.4
SSR1P43307 AL132765.2-201ENST00000610812 351 ntBASIC0.09□□□□□ -2.4
SSR1P43307 AL606534.2-204ENST00000635008 178 ntBASIC0.09□□□□□ -2.4
SSR1P43307 AC099654.14-201ENST00000638599 341 ntBASIC0.09□□□□□ -2.4
SSR1P43307 MIR342-201ENST00000362212 99 ntBASIC0.08□□□□□ -2.4
SSR1P43307 Y_RNA.7-201ENST00000362352 102 ntBASIC0.08□□□□□ -2.4
SSR1P43307 SNORD113-8-201ENST00000363497 74 ntBASIC0.08□□□□□ -2.4
SSR1P43307 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.08□□□□□ -2.4
SSR1P43307 MTCO1P5-201ENST00000433573 344 ntBASIC0.08□□□□□ -2.4
SSR1P43307 snoU13.2-201ENST00000459201 104 ntBASIC0.08□□□□□ -2.4
SSR1P43307 U8.20-201ENST00000459445 131 ntBASIC0.08□□□□□ -2.4
SSR1P43307 RNU6-693P-201ENST00000516134 107 ntBASIC0.08□□□□□ -2.4
SSR1P43307 SNORA20.3-201ENST00000516880 132 ntBASIC0.08□□□□□ -2.4
SSR1P43307 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.08□□□□□ -2.4
SSR1P43307 SNORD92-201ENST00000585078 85 ntBASIC0.08□□□□□ -2.4
SSR1P43307 U6atac.1-201ENST00000616025 117 ntBASIC0.08□□□□□ -2.4
SSR1P43307 Z97988.1-201ENST00000637697 135 ntBASIC0.08□□□□□ -2.4
SSR1P43307 Y_RNA.37-201ENST00000362606 108 ntBASIC0.07□□□□□ -2.4
SSR1P43307 Y_RNA.58-201ENST00000362807 102 ntBASIC0.07□□□□□ -2.4
SSR1P43307 Y_RNA.154-201ENST00000363624 102 ntBASIC0.07□□□□□ -2.4
SSR1P43307 RNU6-899P-201ENST00000363947 107 ntBASIC0.07□□□□□ -2.4
SSR1P43307 RNY3P1-201ENST00000365085 102 ntBASIC0.07□□□□□ -2.4
SSR1P43307 RNU6-597P-201ENST00000365620 102 ntBASIC0.07□□□□□ -2.4
SSR1P43307 Y_RNA.384-201ENST00000383909 102 ntBASIC0.07□□□□□ -2.4
SSR1P43307 MIR548A2-201ENST00000384956 97 ntBASIC0.07□□□□□ -2.4
SSR1P43307 AC138393.2-201ENST00000414742 246 ntBASIC0.07□□□□□ -2.4
SSR1P43307 MIR18B-201ENST00000454574 71 ntBASIC0.07□□□□□ -2.4
SSR1P43307 Y_RNA.637-201ENST00000459424 114 ntBASIC0.07□□□□□ -2.4
SSR1P43307 RNU7-45P-201ENST00000459460 63 ntBASIC0.07□□□□□ -2.4
SSR1P43307 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.07□□□□□ -2.4
SSR1P43307 AL021707.8-201ENST00000609428 183 ntBASIC0.07□□□□□ -2.4
SSR1P43307 AC006157.1-201ENST00000611750 366 ntBASIC0.07□□□□□ -2.4
SSR1P43307 AC007485.1-201ENST00000616755 206 ntBASIC0.07□□□□□ -2.4
SSR1P43307 Y_RNA.187-201ENST00000363918 113 ntBASIC0.06□□□□□ -2.4
SSR1P43307 RNA5SP117-201ENST00000365294 118 ntBASIC0.06□□□□□ -2.4
SSR1P43307 SNORA27-201ENST00000384323 126 ntBASIC0.06□□□□□ -2.4
SSR1P43307 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
SSR1P43307 MIR598-201ENST00000384868 97 ntBASIC0.06□□□□□ -2.4
SSR1P43307 HSPE1P25-201ENST00000455484 251 ntBASIC0.06□□□□□ -2.4
SSR1P43307 SEPT14P8-201ENST00000508026 178 ntBASIC0.06□□□□□ -2.4
SSR1P43307 RNU6-1007P-201ENST00000516586 107 ntBASIC0.06□□□□□ -2.4
SSR1P43307 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
SSR1P43307 AC040926.1-201ENST00000530195 238 ntBASIC0.06□□□□□ -2.4
SSR1P43307 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
SSR1P43307 AC139792.2-201ENST00000624218 587 ntBASIC0.06□□□□□ -2.4
SSR1P43307 MIR30D-201ENST00000362283 70 ntBASIC0.05□□□□□ -2.4
SSR1P43307 SNORA1.1-201ENST00000364671 133 ntBASIC0.05□□□□□ -2.4
SSR1P43307 SNORD61-201ENST00000384252 73 ntBASIC0.05□□□□□ -2.4
SSR1P43307 Y_RNA.572-201ENST00000384757 98 ntBASIC0.05□□□□□ -2.4
SSR1P43307 RNU7-73P-201ENST00000458743 63 ntBASIC0.05□□□□□ -2.4
SSR1P43307 RNU6-448P-201ENST00000517052 107 ntBASIC0.05□□□□□ -2.4
SSR1P43307 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.05□□□□□ -2.4
SSR1P43307 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
SSR1P43307 SNORD113-5-201ENST00000607261 78 ntBASIC0.05□□□□□ -2.4
SSR1P43307 RNU6-740P-201ENST00000364734 105 ntBASIC0.04□□□□□ -2.4
SSR1P43307 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
SSR1P43307 RNU2-11P-201ENST00000459191 187 ntBASIC0.04□□□□□ -2.4
SSR1P43307 RPS29P24-201ENST00000486345 171 ntBASIC0.04□□□□□ -2.4
SSR1P43307 SNORA40.14-201ENST00000516543 86 ntBASIC0.04□□□□□ -2.4
SSR1P43307 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.04□□□□□ -2.4
SSR1P43307 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.04□□□□□ -2.4
SSR1P43307 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
SSR1P43307 Y_RNA.293-201ENST00000364908 93 ntBASIC0.03□□□□□ -2.4
SSR1P43307 Y_RNA.315-201ENST00000365117 102 ntBASIC0.03□□□□□ -2.4
SSR1P43307 SNORA40.5-201ENST00000391061 128 ntBASIC0.03□□□□□ -2.4
SSR1P43307 Y_RNA.587-201ENST00000391210 103 ntBASIC0.03□□□□□ -2.4
SSR1P43307 AC023449.1-201ENST00000454464 154 ntBASIC0.03□□□□□ -2.4
SSR1P43307 RNU7-152P-201ENST00000458982 64 ntBASIC0.03□□□□□ -2.4
SSR1P43307 SNORD19B-201ENST00000459623 84 ntBASIC0.03□□□□□ -2.4
SSR1P43307 AP001282.2-201ENST00000616149 309 ntBASIC0.03□□□□□ -2.4
SSR1P43307 AC013791.1-201ENST00000616619 62 ntBASIC0.03□□□□□ -2.4
SSR1P43307 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.03□□□□□ -2.4
SSR1P43307 Y_RNA.14-201ENST00000362415 103 ntBASIC0.02□□□□□ -2.41
SSR1P43307 Y_RNA.105-201ENST00000363182 111 ntBASIC0.02□□□□□ -2.41
SSR1P43307 RNY1-201ENST00000364228 113 ntBASIC0.02□□□□□ -2.41
SSR1P43307 Y_RNA.222-201ENST00000364264 102 ntBASIC0.02□□□□□ -2.41
SSR1P43307 SNORA63C-201ENST00000364578 129 ntBASIC0.02□□□□□ -2.41
SSR1P43307 Y_RNA.424-201ENST00000384063 103 ntBASIC0.02□□□□□ -2.41
SSR1P43307 RNU6-187P-201ENST00000384139 106 ntBASIC0.02□□□□□ -2.41
SSR1P43307 MIR563-201ENST00000385080 79 ntBASIC0.02□□□□□ -2.41
SSR1P43307 SNORD93-201ENST00000408813 74 ntBASIC0.02□□□□□ -2.41
SSR1P43307 AF228730.3-201ENST00000436691 102 ntBASIC0.02□□□□□ -2.41
SSR1P43307 SNORA62.5-201ENST00000516634 120 ntBASIC0.02□□□□□ -2.41
SSR1P43307 MIR8066-201ENST00000617280 78 ntBASIC0.02□□□□□ -2.41
SSR1P43307 uc_338.16-201ENST00000621804 95 ntBASIC0.02□□□□□ -2.41
SSR1P43307 AC010487.4-201ENST00000637027 61 ntBASIC0.02□□□□□ -2.41
SSR1P43307 MIR367-201ENST00000362299 68 ntBASIC0.01□□□□□ -2.41
SSR1P43307 Y_RNA.252-201ENST00000364556 101 ntBASIC0.01□□□□□ -2.41
SSR1P43307 RNU6-1138P-201ENST00000365359 106 ntBASIC0.01□□□□□ -2.41
SSR1P43307 RNU6-662P-201ENST00000384253 104 ntBASIC0.01□□□□□ -2.41
SSR1P43307 Y_RNA.529-201ENST00000384586 119 ntBASIC0.01□□□□□ -2.41
SSR1P43307 MIR548I3-201ENST00000408378 149 ntBASIC0.01□□□□□ -2.41
SSR1P43307 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms