Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 SNORD115-39-201ENST00000363694 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 Y_RNA.168-201ENST00000363740 102 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-4-201ENST00000363810 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-16-201ENST00000363887 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-28-201ENST00000363931 81 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-6-201ENST00000363942 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-42-201ENST00000364273 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 Y_RNA.241-201ENST00000364470 117 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-15-201ENST00000364809 81 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-1-201ENST00000364961 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-26-201ENST00000365067 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-10-201ENST00000365073 81 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-43-201ENST00000365503 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-36-201ENST00000365629 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 Y_RNA.376-201ENST00000365638 108 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORA24-201ENST00000384096 131 ntBASIC0.67□□□□□ -2.3
SAA4P35542 Y_RNA.572-201ENST00000384757 98 ntBASIC0.67□□□□□ -2.3
SAA4P35542 snoU13.16-201ENST00000459350 104 ntBASIC0.67□□□□□ -2.3
SAA4P35542 RNU6-693P-201ENST00000516134 107 ntBASIC0.67□□□□□ -2.3
SAA4P35542 RNA5SP220-201ENST00000516298 104 ntBASIC0.67□□□□□ -2.3
SAA4P35542 AC100767.1-201ENST00000528178 123 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SNORD115-40-201ENST00000606510 82 ntBASIC0.67□□□□□ -2.3
SAA4P35542 AL136317.1-201ENST00000612653 226 ntBASIC0.67□□□□□ -2.3
SAA4P35542 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
SAA4P35542 Y_RNA.229-201ENST00000364347 113 ntBASIC0.66□□□□□ -2.3
SAA4P35542 Y_RNA.237-201ENST00000364439 102 ntBASIC0.66□□□□□ -2.3
SAA4P35542 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
SAA4P35542 Y_RNA.508-201ENST00000384502 114 ntBASIC0.66□□□□□ -2.3
SAA4P35542 RNU6-713P-201ENST00000384761 107 ntBASIC0.66□□□□□ -2.3
SAA4P35542 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
SAA4P35542 MT-TN-201ENST00000387400 73 ntBASIC0.66□□□□□ -2.3
SAA4P35542 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
SAA4P35542 RNU7-67P-201ENST00000459003 62 ntBASIC0.66□□□□□ -2.3
SAA4P35542 RNU6-365P-201ENST00000517113 106 ntBASIC0.66□□□□□ -2.3
SAA4P35542 SNORA4-201ENST00000584302 138 ntBASIC0.66□□□□□ -2.3
SAA4P35542 MIR6734-201ENST00000621166 68 ntBASIC0.66□□□□□ -2.3
SAA4P35542 7SK.10-201ENST00000621414 298 ntBASIC0.66□□□□□ -2.3
SAA4P35542 Y_RNA.37-201ENST00000362606 108 ntBASIC0.65□□□□□ -2.31
SAA4P35542 RNU6-740P-201ENST00000364734 105 ntBASIC0.65□□□□□ -2.31
SAA4P35542 RNU6-580P-201ENST00000365159 107 ntBASIC0.65□□□□□ -2.31
SAA4P35542 SNORD24-201ENST00000383884 75 ntBASIC0.65□□□□□ -2.31
SAA4P35542 MIR518F-201ENST00000384973 87 ntBASIC0.65□□□□□ -2.31
SAA4P35542 SNORA40.5-201ENST00000391061 128 ntBASIC0.65□□□□□ -2.31
SAA4P35542 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.65□□□□□ -2.31
SAA4P35542 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.65□□□□□ -2.31
SAA4P35542 AP003072.1-201ENST00000531740 145 ntBASIC0.65□□□□□ -2.31
SAA4P35542 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
SAA4P35542 MIR377-201ENST00000362145 69 ntBASIC0.64□□□□□ -2.31
SAA4P35542 MIR1-1-201ENST00000362147 71 ntBASIC0.64□□□□□ -2.31
SAA4P35542 MIR335-201ENST00000362173 94 ntBASIC0.64□□□□□ -2.31
SAA4P35542 Y_RNA.355-201ENST00000365462 98 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU6-42P-201ENST00000384165 107 ntBASIC0.64□□□□□ -2.31
SAA4P35542 SNORD61-201ENST00000384252 73 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU6-125P-201ENST00000384505 107 ntBASIC0.64□□□□□ -2.31
SAA4P35542 Y_RNA.512-201ENST00000384518 102 ntBASIC0.64□□□□□ -2.31
SAA4P35542 MIR548A2-201ENST00000384956 97 ntBASIC0.64□□□□□ -2.31
SAA4P35542 MIR1827-201ENST00000408549 66 ntBASIC0.64□□□□□ -2.31
SAA4P35542 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU2-55P-201ENST00000411146 174 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
SAA4P35542 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU6-504P-201ENST00000516568 104 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU6-635P-201ENST00000516651 102 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU6-958P-201ENST00000516995 106 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RNU6-1223P-201ENST00000517124 104 ntBASIC0.64□□□□□ -2.31
SAA4P35542 AC013244.2-201ENST00000603396 103 ntBASIC0.64□□□□□ -2.31
SAA4P35542 AP000753.3-201ENST00000604083 169 ntBASIC0.64□□□□□ -2.31
SAA4P35542 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
SAA4P35542 RMST_2.1-201ENST00000617263 136 ntBASIC0.64□□□□□ -2.31
SAA4P35542 AC134878.1-201ENST00000619901 243 ntBASIC0.64□□□□□ -2.31
SAA4P35542 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
SAA4P35542 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.82-201ENST00000363000 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 RNU6-888P-201ENST00000363010 101 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.92-201ENST00000363043 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 SNORD45.3-201ENST00000363836 72 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.235-201ENST00000364412 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.306-201ENST00000365015 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.312-201ENST00000365089 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.322-201ENST00000365151 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 RNY3P5-201ENST00000384127 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 MIR100-201ENST00000385259 80 ntBASIC0.63□□□□□ -2.31
SAA4P35542 SNORA26-201ENST00000391286 122 ntBASIC0.63□□□□□ -2.31
SAA4P35542 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.63□□□□□ -2.31
SAA4P35542 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.63□□□□□ -2.31
SAA4P35542 RNU6-651P-201ENST00000411040 105 ntBASIC0.63□□□□□ -2.31
SAA4P35542 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.63□□□□□ -2.31
SAA4P35542 SNORD2.1-201ENST00000458762 69 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.650-201ENST00000459002 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 RNU6-351P-201ENST00000516097 100 ntBASIC0.63□□□□□ -2.31
SAA4P35542 RNU6-1299P-201ENST00000516316 100 ntBASIC0.63□□□□□ -2.31
SAA4P35542 SNORA18.4-201ENST00000516440 124 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.777-201ENST00000516982 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.720-201ENST00000517166 92 ntBASIC0.63□□□□□ -2.31
SAA4P35542 AP003484.1-201ENST00000530974 250 ntBASIC0.63□□□□□ -2.31
SAA4P35542 AC006504.6-201ENST00000590142 199 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.771-201ENST00000598668 102 ntBASIC0.63□□□□□ -2.31
SAA4P35542 AP000942.4-201ENST00000604811 241 ntBASIC0.63□□□□□ -2.31
SAA4P35542 Y_RNA.789-201ENST00000622480 102 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms