Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MIR1-1-201ENST00000362147 71 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 Y_RNA.226-201ENST00000364337 114 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 RNU6-654P-201ENST00000364373 107 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 SNORA40.5-201ENST00000391061 128 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 RNU2-55P-201ENST00000411146 174 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.86□□□□□ -2.27
HOXD13P35453 MTND5P22-201ENST00000458380 195 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 AC100767.1-201ENST00000528178 123 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 7SK.10-201ENST00000621414 298 ntBASIC0.86□□□□□ -2.27
HOXD13P35453 MIR377-201ENST00000362145 69 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 SNORA25.9-201ENST00000365087 128 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 MIR520E-201ENST00000384867 87 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 MIR499A-201ENST00000384903 122 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 MIR626-201ENST00000385032 94 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 AL035398.1-201ENST00000430869 322 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 RNU7-53P-201ENST00000516705 60 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.85□□□□□ -2.27
HOXD13P35453 AL442663.2-201ENST00000554385 511 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 AC104465.1-201ENST00000611365 139 ntBASIC0.85□□□□□ -2.27
HOXD13P35453 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.84□□□□□ -2.27
HOXD13P35453 Y_RNA.229-201ENST00000364347 113 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 RNY3P5-201ENST00000384127 102 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 RNU6-110P-201ENST00000384508 104 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 MIR1302-6-201ENST00000408466 90 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 RNU6-1299P-201ENST00000516316 100 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 MIR4264-201ENST00000583520 66 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 AC134878.1-201ENST00000619901 243 ntBASIC0.84□□□□□ -2.27
HOXD13P35453 RNU4-10P-201ENST00000364383 140 ntBASIC0.83□□□□□ -2.28
HOXD13P35453 SNORA24-201ENST00000384096 131 ntBASIC0.83□□□□□ -2.28
HOXD13P35453 RNU6-635P-201ENST00000516651 102 ntBASIC0.83□□□□□ -2.28
HOXD13P35453 AP003484.1-201ENST00000530974 250 ntBASIC0.83□□□□□ -2.28
HOXD13P35453 AP000942.4-201ENST00000604811 241 ntBASIC0.83□□□□□ -2.28
HOXD13P35453 MIR335-201ENST00000362173 94 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 Y_RNA.237-201ENST00000364439 102 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 RNA5SP95-201ENST00000410319 137 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 RNU2-70P-201ENST00000410718 179 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 RNA5SP247-201ENST00000411181 105 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.82□□□□□ -2.28
HOXD13P35453 Y_RNA.679-201ENST00000516416 91 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 RNU6-958P-201ENST00000516995 106 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 U2.14-201ENST00000615943 113 ntBASIC0.82□□□□□ -2.28
HOXD13P35453 Y_RNA.37-201ENST00000362606 108 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 Y_RNA.117-201ENST00000363294 101 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 SNORA63C-201ENST00000364578 129 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 RNU6-740P-201ENST00000364734 105 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 SNORA27-201ENST00000384323 126 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 SNORD99-201ENST00000408612 74 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 Y_RNA.590-201ENST00000410140 107 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 RNU6-1153P-201ENST00000516760 105 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 Y_RNA.720-201ENST00000517166 92 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 AC007751.1-201ENST00000529260 376 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 AP001282.2-201ENST00000616149 309 ntBASIC0.81□□□□□ -2.28
HOXD13P35453 Y_RNA.82-201ENST00000363000 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 RNU6-888P-201ENST00000363010 101 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.92-201ENST00000363043 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 SNORA63-201ENST00000363450 132 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.235-201ENST00000364412 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.306-201ENST00000365015 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.312-201ENST00000365089 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.322-201ENST00000365151 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HOXD13P35453 SNORD61-201ENST00000384252 73 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 SNORD38B-201ENST00000384690 67 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 MIR1287-201ENST00000408492 90 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 AC004941.2-201ENST00000427009 228 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 RNU7-73P-201ENST00000458743 63 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.650-201ENST00000459002 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 RNA5SP153-201ENST00000516498 76 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.777-201ENST00000516982 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 MIR4452-201ENST00000583004 71 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.771-201ENST00000598668 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 Y_RNA.789-201ENST00000622480 102 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 SNORD38B-202ENST00000625943 69 ntBASIC0.8□□□□□ -2.28
HOXD13P35453 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HOXD13P35453 RNU6-238P-201ENST00000363313 106 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 RNU6-580P-201ENST00000365159 107 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 Y_RNA.432-201ENST00000384087 111 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 MIR518F-201ENST00000384973 87 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 SNORD105-201ENST00000386910 85 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 RPS29P24-201ENST00000486345 171 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 SNORA18.4-201ENST00000516440 124 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 RNU6-1270P-201ENST00000517128 108 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 AP003072.1-201ENST00000531740 145 ntBASIC0.79□□□□□ -2.28
HOXD13P35453 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 RNU6-1335P-201ENST00000365426 107 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 Y_RNA.410-201ENST00000383992 113 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 MIR605-201ENST00000385078 83 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 RPS26P5-201ENST00000418544 335 ntBASIC0.78□□□□□ -2.28
HOXD13P35453 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.78□□□□□ -2.28
HOXD13P35453 SNORD2.1-201ENST00000458762 69 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 283.6 ms