Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-1248P-201ENST00000391096 64 ntBASIC0.31□□□□□ -2.36
RORAP35398 Y_RNA.645-201ENST00000391229 102 ntBASIC0.31□□□□□ -2.36
RORAP35398 RNU2-70P-201ENST00000410718 179 ntBASIC0.31□□□□□ -2.36
RORAP35398 RNU7-62P-201ENST00000458856 62 ntBASIC0.31□□□□□ -2.36
RORAP35398 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
RORAP35398 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.31□□□□□ -2.36
RORAP35398 SNORD115-40-201ENST00000606510 82 ntBASIC0.31□□□□□ -2.36
RORAP35398 AC122108.2-201ENST00000611946 526 ntBASIC0.31□□□□□ -2.36
RORAP35398 AC134878.1-201ENST00000619901 243 ntBASIC0.31□□□□□ -2.36
RORAP35398 uc_338.22-201ENST00000622722 187 ntBASIC0.31□□□□□ -2.36
RORAP35398 MIR924-201ENST00000638017 53 ntBASIC0.31□□□□□ -2.36
RORAP35398 RNU6-1205P-201ENST00000363625 106 ntBASIC0.3□□□□□ -2.36
RORAP35398 RNU6-1138P-201ENST00000365359 106 ntBASIC0.3□□□□□ -2.36
RORAP35398 RNU6-144P-201ENST00000383951 107 ntBASIC0.3□□□□□ -2.36
RORAP35398 MIR548A2-201ENST00000384956 97 ntBASIC0.3□□□□□ -2.36
RORAP35398 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
RORAP35398 SNORD115-46-201ENST00000390982 71 ntBASIC0.3□□□□□ -2.36
RORAP35398 Y_RNA.602-201ENST00000410535 92 ntBASIC0.3□□□□□ -2.36
RORAP35398 AC236972.2-201ENST00000434979 310 ntBASIC0.3□□□□□ -2.36
RORAP35398 RNU6-397P-201ENST00000516226 104 ntBASIC0.3□□□□□ -2.36
RORAP35398 SNORA18.4-201ENST00000516440 124 ntBASIC0.3□□□□□ -2.36
RORAP35398 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.3□□□□□ -2.36
RORAP35398 AL049861.1-201ENST00000603130 150 ntBASIC0.3□□□□□ -2.36
RORAP35398 AP000942.4-201ENST00000604811 241 ntBASIC0.3□□□□□ -2.36
RORAP35398 RAC1P9-201ENST00000604990 392 ntBASIC0.3□□□□□ -2.36
RORAP35398 MIR8055-201ENST00000610739 97 ntBASIC0.3□□□□□ -2.36
RORAP35398 MIR376A1-201ENST00000616574 68 ntBASIC0.3□□□□□ -2.36
RORAP35398 AC013791.1-201ENST00000616619 62 ntBASIC0.3□□□□□ -2.36
RORAP35398 Y_RNA.241-201ENST00000364470 117 ntBASIC0.29□□□□□ -2.36
RORAP35398 Y_RNA.395-201ENST00000383945 109 ntBASIC0.29□□□□□ -2.36
RORAP35398 Y_RNA.486-201ENST00000384398 107 ntBASIC0.29□□□□□ -2.36
RORAP35398 RNU6-1009P-201ENST00000390996 107 ntBASIC0.29□□□□□ -2.36
RORAP35398 Y_RNA.587-201ENST00000391210 103 ntBASIC0.29□□□□□ -2.36
RORAP35398 RNU6-121P-201ENST00000410525 99 ntBASIC0.29□□□□□ -2.36
RORAP35398 AL358176.2-201ENST00000425769 204 ntBASIC0.29□□□□□ -2.36
RORAP35398 MTND4P19-201ENST00000446659 478 ntBASIC0.29□□□□□ -2.36
RORAP35398 Y_RNA.639-201ENST00000458981 102 ntBASIC0.29□□□□□ -2.36
RORAP35398 RNA5SP330-201ENST00000517096 96 ntBASIC0.29□□□□□ -2.36
RORAP35398 AC008608.1-201ENST00000603910 127 ntBASIC0.29□□□□□ -2.36
RORAP35398 Z97988.1-201ENST00000637697 135 ntBASIC0.29□□□□□ -2.36
RORAP35398 Y_RNA.424-201ENST00000384063 103 ntBASIC0.28□□□□□ -2.36
RORAP35398 Y_RNA.445-201ENST00000384168 102 ntBASIC0.28□□□□□ -2.36
RORAP35398 MIR518F-201ENST00000384973 87 ntBASIC0.28□□□□□ -2.36
RORAP35398 HMGN1P33-201ENST00000432945 451 ntBASIC0.28□□□□□ -2.36
RORAP35398 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.28□□□□□ -2.36
RORAP35398 RNU7-73P-201ENST00000458743 63 ntBASIC0.28□□□□□ -2.36
RORAP35398 RNU7-67P-201ENST00000459003 62 ntBASIC0.28□□□□□ -2.36
RORAP35398 AC107297.1-201ENST00000459991 176 ntBASIC0.28□□□□□ -2.36
RORAP35398 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
RORAP35398 SNORD77.4-201ENST00000516158 81 ntBASIC0.28□□□□□ -2.36
RORAP35398 RNU6-958P-201ENST00000516995 106 ntBASIC0.28□□□□□ -2.36
RORAP35398 MIR4795-201ENST00000584182 89 ntBASIC0.28□□□□□ -2.36
RORAP35398 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
RORAP35398 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
RORAP35398 AC010332.2-201ENST00000613083 1904 ntBASIC0.28□□□□□ -2.36
RORAP35398 Y_RNA.31-201ENST00000362574 102 ntBASIC0.27□□□□□ -2.37
RORAP35398 RNU6-1272P-201ENST00000362776 107 ntBASIC0.27□□□□□ -2.37
RORAP35398 RNU4-73P-201ENST00000363164 141 ntBASIC0.27□□□□□ -2.37
RORAP35398 Y_RNA.183-201ENST00000363882 113 ntBASIC0.27□□□□□ -2.37
RORAP35398 SNORD115-28-201ENST00000363931 81 ntBASIC0.27□□□□□ -2.37
RORAP35398 Y_RNA.569-201ENST00000384749 103 ntBASIC0.27□□□□□ -2.37
RORAP35398 AC023449.1-201ENST00000454464 154 ntBASIC0.27□□□□□ -2.37
RORAP35398 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.27□□□□□ -2.37
RORAP35398 RNU6-897P-201ENST00000517135 105 ntBASIC0.27□□□□□ -2.37
RORAP35398 AL355297.3-201ENST00000604082 446 ntBASIC0.27□□□□□ -2.37
RORAP35398 AL133255.1-201ENST00000606374 441 ntBASIC0.27□□□□□ -2.37
RORAP35398 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.27□□□□□ -2.37
RORAP35398 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
RORAP35398 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
RORAP35398 RNU6-450P-201ENST00000364654 107 ntBASIC0.26□□□□□ -2.37
RORAP35398 Y_RNA.581-201ENST00000391017 97 ntBASIC0.26□□□□□ -2.37
RORAP35398 RNA5SP496-201ENST00000391240 109 ntBASIC0.26□□□□□ -2.37
RORAP35398 RNU6-1190P-201ENST00000410811 104 ntBASIC0.26□□□□□ -2.37
RORAP35398 MTND5P20-201ENST00000448677 143 ntBASIC0.26□□□□□ -2.37
RORAP35398 AC082651.2-201ENST00000496833 166 ntBASIC0.26□□□□□ -2.37
RORAP35398 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
RORAP35398 MTND3P22-201ENST00000510932 243 ntBASIC0.26□□□□□ -2.37
RORAP35398 MTCO2P24-201ENST00000515611 426 ntBASIC0.26□□□□□ -2.37
RORAP35398 SNORD36C-201ENST00000516733 66 ntBASIC0.26□□□□□ -2.37
RORAP35398 MIR5692C2-201ENST00000577959 77 ntBASIC0.26□□□□□ -2.37
RORAP35398 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
RORAP35398 Y_RNA.37-201ENST00000362606 108 ntBASIC0.25□□□□□ -2.37
RORAP35398 RNU4-90P-201ENST00000362773 141 ntBASIC0.25□□□□□ -2.37
RORAP35398 SNORA63C-201ENST00000364578 129 ntBASIC0.25□□□□□ -2.37
RORAP35398 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
RORAP35398 SNORD42.2-201ENST00000365570 69 ntBASIC0.25□□□□□ -2.37
RORAP35398 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
RORAP35398 RNY3P14-201ENST00000384309 102 ntBASIC0.25□□□□□ -2.37
RORAP35398 RNU6-823P-201ENST00000391042 103 ntBASIC0.25□□□□□ -2.37
RORAP35398 SNORA40.5-201ENST00000391061 128 ntBASIC0.25□□□□□ -2.37
RORAP35398 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
RORAP35398 SNORD100-201ENST00000408573 76 ntBASIC0.25□□□□□ -2.37
RORAP35398 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.25□□□□□ -2.37
RORAP35398 AC087499.4-201ENST00000448505 178 ntBASIC0.25□□□□□ -2.37
RORAP35398 Y_RNA.702-201ENST00000516843 96 ntBASIC0.25□□□□□ -2.37
RORAP35398 RNU2-31P-201ENST00000516954 155 ntBASIC0.25□□□□□ -2.37
RORAP35398 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.25□□□□□ -2.37
RORAP35398 AC124312.5-201ENST00000604451 268 ntBASIC0.25□□□□□ -2.37
RORAP35398 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.25□□□□□ -2.37
RORAP35398 MIR369-201ENST00000362155 70 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms