Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 SNORD116-29-201ENST00000384516 83 ntBASIC0□□□□□ -2.41
SLC6A1P30531 MIR563-201ENST00000385080 79 ntBASIC0□□□□□ -2.41
SLC6A1P30531 RNU6-308P-201ENST00000390957 107 ntBASIC0□□□□□ -2.41
SLC6A1P30531 MTND1P14-201ENST00000427400 950 ntBASIC0□□□□□ -2.41
SLC6A1P30531 NDUFAF4P4-201ENST00000454883 502 ntBASIC0□□□□□ -2.41
SLC6A1P30531 snoU13.2-201ENST00000459201 104 ntBASIC0□□□□□ -2.41
SLC6A1P30531 RNU6-1170P-201ENST00000515974 106 ntBASIC0□□□□□ -2.41
SLC6A1P30531 RNU7-149P-201ENST00000516739 59 ntBASIC0□□□□□ -2.41
SLC6A1P30531 RNU6-448P-201ENST00000517052 107 ntBASIC0□□□□□ -2.41
SLC6A1P30531 AC112693.2-201ENST00000556538 232 ntBASIC0□□□□□ -2.41
SLC6A1P30531 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0□□□□□ -2.41
SLC6A1P30531 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
SLC6A1P30531 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 RNA5SP117-201ENST00000365294 118 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 MT-TL1-201ENST00000386347 75 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 RNU6-876P-201ENST00000391295 104 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 RNU6-602P-201ENST00000411155 105 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 RNU6-938P-201ENST00000411285 103 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 POLR2KP2-201ENST00000438155 177 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 AL121655.1-201ENST00000605811 308 ntBASIC-0.01□□□□□ -2.41
SLC6A1P30531 MIR30D-201ENST00000362283 70 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 SNORD115-28-201ENST00000363931 81 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 RNY4P36-201ENST00000391116 96 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 MTCO1P5-201ENST00000433573 344 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 AC087499.4-201ENST00000448505 178 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 AC092794.1-201ENST00000612734 582 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.02□□□□□ -2.41
SLC6A1P30531 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNY3-201ENST00000365484 102 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 SNORD12C-201ENST00000386307 89 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 MT-TF-201ENST00000387314 71 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 SNORA40.5-201ENST00000391061 128 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU2-59P-201ENST00000410482 191 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU6-383P-201ENST00000410864 94 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU6-191P-201ENST00000516295 94 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU4-77P-201ENST00000516692 156 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU7-53P-201ENST00000516705 60 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 SNORD116.3-201ENST00000517176 78 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 AL049861.1-201ENST00000603130 150 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 AC104985.2-201ENST00000620598 500 ntBASIC-0.03□□□□□ -2.41
SLC6A1P30531 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.03□□□□□ -2.41
SLC6A1P30531 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 RNU6-899P-201ENST00000363947 107 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 RNU4-40P-201ENST00000364351 143 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 SNORA1.1-201ENST00000364671 133 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 SNORA27-201ENST00000384323 126 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 MIR548A2-201ENST00000384956 97 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.04□□□□□ -2.42
SLC6A1P30531 AC023449.1-201ENST00000454464 154 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 RPS29P24-201ENST00000486345 171 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 RPS29P30-201ENST00000600975 111 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 AC122108.2-201ENST00000611946 526 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 AC025253.1-201ENST00000613623 543 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 AC084781.2-201ENST00000615568 161 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 MIR2909-201ENST00000617113 69 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 AC099654.14-201ENST00000638599 341 ntBASIC-0.04□□□□□ -2.42
SLC6A1P30531 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 RNA5SP214-201ENST00000363378 118 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 MIR644A-201ENST00000385262 94 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 RNU6-763P-201ENST00000390865 106 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 AL160004.2-201ENST00000432935 350 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 SEPT7P4-201ENST00000437076 306 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 RNU6-277P-201ENST00000516272 106 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 SNORD36C-201ENST00000516733 66 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 AC092447.9-201ENST00000603395 144 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 SNORD58B-201ENST00000607313 66 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 PART1_1.1-201ENST00000611761 217 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 MIR8066-201ENST00000617280 78 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 MIR6755-201ENST00000619993 66 ntBASIC-0.05□□□□□ -2.42
SLC6A1P30531 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 SNORA72.1-201ENST00000363485 129 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 RNU6-144P-201ENST00000383951 107 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 RNU6-130P-201ENST00000411112 103 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.06□□□□□ -2.42
SLC6A1P30531 U8.20-201ENST00000459445 131 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 SNORD77.4-201ENST00000516158 81 ntBASIC-0.06□□□□□ -2.42
SLC6A1P30531 SNORA40.14-201ENST00000516543 86 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms