Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MIR8062-201ENST00000621515 85 ntBASIC0.78□□□□□ -2.28
PTPN4P29074 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
PTPN4P29074 RNU6-238P-201ENST00000363313 106 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 RNU6-740P-201ENST00000364734 105 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 SNORA1.2-201ENST00000365189 134 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 Y_RNA.537-201ENST00000384626 109 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 SNORA8.3-201ENST00000384679 139 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 Y_RNA.572-201ENST00000384757 98 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 MT-TW-201ENST00000387382 68 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 MIR548O-201ENST00000408583 114 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 AC067940.1-201ENST00000458411 300 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 RNU2-13P-201ENST00000515909 113 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 RNA5SP436-201ENST00000516020 115 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 Y_RNA.666-201ENST00000516187 112 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 AL442663.2-201ENST00000554385 511 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 MIR4662B-201ENST00000579498 81 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 AC131055.1-201ENST00000584626 316 ntBASIC0.77□□□□□ -2.29
PTPN4P29074 MIR335-201ENST00000362173 94 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 Y_RNA.24-201ENST00000362508 103 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 SNORD114-26-201ENST00000363543 72 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 Y_RNA.229-201ENST00000364347 113 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 RNU1-133P-201ENST00000364867 167 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 Y_RNA.483-201ENST00000384380 101 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 Y_RNA.486-201ENST00000384398 107 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 SNORA51.10-201ENST00000384418 136 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 Y_RNA.518-201ENST00000384552 113 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 Y_RNA.574-201ENST00000384766 95 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 MIR7-2-201ENST00000384970 110 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 MIR626-201ENST00000385032 94 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 RNU6-651P-201ENST00000411040 105 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 SNORD2.1-201ENST00000458762 69 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.76□□□□□ -2.29
PTPN4P29074 RNA5SP255-201ENST00000516370 107 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 AC100767.1-201ENST00000528178 123 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 AC023827.1-201ENST00000569247 97 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 MIR4791-201ENST00000607666 84 ntBASIC0.76□□□□□ -2.29
PTPN4P29074 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.82-201ENST00000363000 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.92-201ENST00000363043 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.145-201ENST00000363527 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.235-201ENST00000364412 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.306-201ENST00000365015 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.312-201ENST00000365089 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.322-201ENST00000365151 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.461-201ENST00000384263 103 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 RNU6-472P-201ENST00000384299 107 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.587-201ENST00000391210 103 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 MIR1302-6-201ENST00000408466 90 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 RNU6-847P-201ENST00000411115 108 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.650-201ENST00000459002 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 U7.7-201ENST00000459276 60 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.777-201ENST00000516982 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 AC007751.1-201ENST00000529260 376 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 AC109810.1-201ENST00000534066 224 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 MIR548AO-201ENST00000579992 96 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.771-201ENST00000598668 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 Y_RNA.789-201ENST00000622480 102 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 MIR6516-201ENST00000630554 81 ntBASIC0.75□□□□□ -2.29
PTPN4P29074 RNU6-694P-201ENST00000364071 147 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 RNU6-654P-201ENST00000364373 107 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 RNU6-1011P-201ENST00000384668 107 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 SNORD111-201ENST00000408139 94 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 SCARNA8-201ENST00000515924 131 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 AC036111.3-201ENST00000526389 112 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 AL117187.1-201ENST00000555482 181 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.74□□□□□ -2.29
PTPN4P29074 MTND1P7-201ENST00000632801 297 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 U6.104-201ENST00000637979 90 ntBASIC0.74□□□□□ -2.29
PTPN4P29074 RNU6-110P-201ENST00000384508 104 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 RNU6-738P-201ENST00000384531 106 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 MIR548A2-201ENST00000384956 97 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 RNU6-1132P-201ENST00000459214 107 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.73□□□□□ -2.29
PTPN4P29074 MIR4282-201ENST00000583613 67 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 AC008737.2-201ENST00000599446 118 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 AC243994.1-201ENST00000618627 109 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
PTPN4P29074 Y_RNA.36-201ENST00000362602 112 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 Y_RNA.176-201ENST00000363815 109 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 SNORD115-28-201ENST00000363931 81 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 SNORD24-201ENST00000383884 75 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 SNORA24-201ENST00000384096 131 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 Y_RNA.494-201ENST00000384432 111 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 MIR518F-201ENST00000384973 87 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 RNU6-613P-201ENST00000410412 108 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.72□□□□□ -2.29
PTPN4P29074 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 MIR2115-201ENST00000516657 100 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 RNU6-126P-201ENST00000516685 103 ntBASIC0.72□□□□□ -2.29
PTPN4P29074 SNORD115-34-201ENST00000362441 82 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms