Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC007012.1-201ENST00000567192 175 ntBASIC2.82□□□□□ -1.96
RFX1P22670 MIR548AR-201ENST00000582191 57 ntBASIC2.82□□□□□ -1.96
RFX1P22670 MIR4305-201ENST00000583252 102 ntBASIC2.82□□□□□ -1.96
RFX1P22670 AL773524.1-201ENST00000614065 229 ntBASIC2.82□□□□□ -1.96
RFX1P22670 RNU6-457P-201ENST00000363999 107 ntBASIC2.81□□□□□ -1.96
RFX1P22670 RNU6-1067P-201ENST00000384752 107 ntBASIC2.81□□□□□ -1.96
RFX1P22670 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.81□□□□□ -1.96
RFX1P22670 RN7SKP192-201ENST00000411291 327 ntBASIC2.81□□□□□ -1.96
RFX1P22670 AL161935.2-201ENST00000414627 60 ntBASIC2.81□□□□□ -1.96
RFX1P22670 RNU2-11P-201ENST00000459191 187 ntBASIC2.81□□□□□ -1.96
RFX1P22670 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX1P22670 AC022254.1-201ENST00000567857 235 ntBASIC2.81□□□□□ -1.96
RFX1P22670 RNU6-203P-201ENST00000384038 104 ntBASIC2.8□□□□□ -1.96
RFX1P22670 RPS12P2-201ENST00000439728 269 ntBASIC2.8□□□□□ -1.96
RFX1P22670 RNU1-41P-201ENST00000516161 162 ntBASIC2.8□□□□□ -1.96
RFX1P22670 RNU1-48P-201ENST00000516400 162 ntBASIC2.8□□□□□ -1.96
RFX1P22670 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.8□□□□□ -1.96
RFX1P22670 MIR3670-2-201ENST00000582974 65 ntBASIC2.8□□□□□ -1.96
RFX1P22670 MIR3670-1-201ENST00000584160 65 ntBASIC2.8□□□□□ -1.96
RFX1P22670 MIR3670-3-201ENST00000584855 65 ntBASIC2.8□□□□□ -1.96
RFX1P22670 MIR3670-4-201ENST00000612260 65 ntBASIC2.8□□□□□ -1.96
RFX1P22670 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RFX1P22670 RNU6-661P-201ENST00000362409 107 ntBASIC2.79□□□□□ -1.96
RFX1P22670 RNA5SP276-201ENST00000362580 94 ntBASIC2.79□□□□□ -1.96
RFX1P22670 JTBP1-201ENST00000441314 247 ntBASIC2.79□□□□□ -1.96
RFX1P22670 RNU7-123P-201ENST00000515911 60 ntBASIC2.79□□□□□ -1.96
RFX1P22670 SNORA74.3-201ENST00000517108 154 ntBASIC2.79□□□□□ -1.96
RFX1P22670 MIR3613-201ENST00000579844 87 ntBASIC2.79□□□□□ -1.96
RFX1P22670 FAM106DP-201ENST00000586416 501 ntBASIC2.79□□□□□ -1.96
RFX1P22670 ZNF658B-202ENST00000615961 3375 ntBASIC2.79□□□□□ -1.96
RFX1P22670 Y_RNA.43-201ENST00000362670 111 ntBASIC2.78□□□□□ -1.96
RFX1P22670 Y_RNA.213-201ENST00000364178 111 ntBASIC2.78□□□□□ -1.96
RFX1P22670 RNU4-16P-201ENST00000364737 141 ntBASIC2.78□□□□□ -1.96
RFX1P22670 Y_RNA.281-201ENST00000364774 94 ntBASIC2.78□□□□□ -1.96
RFX1P22670 Y_RNA.537-201ENST00000384626 109 ntBASIC2.78□□□□□ -1.96
RFX1P22670 MIR653-201ENST00000385279 96 ntBASIC2.78□□□□□ -1.96
RFX1P22670 MIR759-201ENST00000390224 91 ntBASIC2.78□□□□□ -1.96
RFX1P22670 SNORD28B-201ENST00000390993 75 ntBASIC2.78□□□□□ -1.96
RFX1P22670 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
RFX1P22670 AC244636.1-201ENST00000421152 228 ntBASIC2.78□□□□□ -1.96
RFX1P22670 RNU6-412P-201ENST00000516434 106 ntBASIC2.78□□□□□ -1.96
RFX1P22670 RNU2-35P-201ENST00000516446 142 ntBASIC2.78□□□□□ -1.96
RFX1P22670 AC021613.1-201ENST00000623880 111 ntBASIC2.78□□□□□ -1.96
RFX1P22670 RNY4P6-201ENST00000363667 96 ntBASIC2.77□□□□□ -1.97
RFX1P22670 SNORA16B-201ENST00000364674 135 ntBASIC2.77□□□□□ -1.97
RFX1P22670 RNA5SP425-201ENST00000410336 112 ntBASIC2.77□□□□□ -1.97
RFX1P22670 RPS29P29-201ENST00000456396 171 ntBASIC2.77□□□□□ -1.97
RFX1P22670 RNU7-67P-201ENST00000459003 62 ntBASIC2.77□□□□□ -1.97
RFX1P22670 AC108210.2-201ENST00000503681 201 ntBASIC2.77□□□□□ -1.97
RFX1P22670 RNU7-53P-201ENST00000516705 60 ntBASIC2.77□□□□□ -1.97
RFX1P22670 RNU6-958P-201ENST00000516995 106 ntBASIC2.77□□□□□ -1.97
RFX1P22670 RNA5SP170-201ENST00000517150 101 ntBASIC2.77□□□□□ -1.97
RFX1P22670 MIR4679-2-201ENST00000578358 77 ntBASIC2.77□□□□□ -1.97
RFX1P22670 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.77□□□□□ -1.97
RFX1P22670 AC092881.1-201ENST00000638218 2733 ntBASIC2.77□□□□□ -1.97
RFX1P22670 RNU6-414P-201ENST00000363705 104 ntBASIC2.76□□□□□ -1.97
RFX1P22670 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
RFX1P22670 RNU6-1104P-201ENST00000384723 104 ntBASIC2.76□□□□□ -1.97
RFX1P22670 MT-TI-201ENST00000387365 69 ntBASIC2.76□□□□□ -1.97
RFX1P22670 SNORA3.2-201ENST00000408221 125 ntBASIC2.76□□□□□ -1.97
RFX1P22670 snoU13.15-201ENST00000459407 104 ntBASIC2.76□□□□□ -1.97
RFX1P22670 AC009831.4-201ENST00000620744 325 ntBASIC2.76□□□□□ -1.97
RFX1P22670 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFX1P22670 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RFX1P22670 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
RFX1P22670 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RFX1P22670 RNU6-147P-201ENST00000383983 107 ntBASIC2.75□□□□□ -1.97
RFX1P22670 RNU6-1319P-201ENST00000390855 104 ntBASIC2.75□□□□□ -1.97
RFX1P22670 RNU6-747P-201ENST00000390928 104 ntBASIC2.75□□□□□ -1.97
RFX1P22670 RNU6-241P-201ENST00000391148 104 ntBASIC2.75□□□□□ -1.97
RFX1P22670 RNA5SP144-201ENST00000410846 116 ntBASIC2.75□□□□□ -1.97
RFX1P22670 RNU6-177P-201ENST00000411257 104 ntBASIC2.75□□□□□ -1.97
RFX1P22670 RNU6-893P-201ENST00000458841 100 ntBASIC2.75□□□□□ -1.97
RFX1P22670 RNU7-43P-201ENST00000516554 64 ntBASIC2.75□□□□□ -1.97
RFX1P22670 DEFB122-202ENST00000569013 197 ntBASIC2.75□□□□□ -1.97
RFX1P22670 FO624990.1-201ENST00000636373 85 ntBASIC2.75□□□□□ -1.97
RFX1P22670 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RFX1P22670 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RFX1P22670 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
RFX1P22670 Y_RNA.549-201ENST00000384657 102 ntBASIC2.74□□□□□ -1.97
RFX1P22670 RNU7-73P-201ENST00000458743 63 ntBASIC2.74□□□□□ -1.97
RFX1P22670 IGKV3-31-201ENST00000523109 329 ntBASIC2.74□□□□□ -1.97
RFX1P22670 MIR4713-201ENST00000582691 75 ntBASIC2.74□□□□□ -1.97
RFX1P22670 AC243994.1-201ENST00000618627 109 ntBASIC2.74□□□□□ -1.97
RFX1P22670 AC095038.3-201ENST00000634439 195 ntBASIC2.74□□□□□ -1.97
RFX1P22670 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX1P22670 RNU6-1255P-201ENST00000363434 112 ntBASIC2.73□□□□□ -1.97
RFX1P22670 RNA5SP456-201ENST00000364002 114 ntBASIC2.73□□□□□ -1.97
RFX1P22670 SNORD12C-201ENST00000386307 89 ntBASIC2.73□□□□□ -1.97
RFX1P22670 RNA5SP261-201ENST00000410536 106 ntBASIC2.73□□□□□ -1.97
RFX1P22670 RNU4-53P-201ENST00000410828 140 ntBASIC2.73□□□□□ -1.97
RFX1P22670 Z98742.3-201ENST00000418637 326 ntBASIC2.73□□□□□ -1.97
RFX1P22670 RPL23AP6-201ENST00000446637 472 ntBASIC2.73□□□□□ -1.97
RFX1P22670 RNU7-45P-201ENST00000459460 63 ntBASIC2.73□□□□□ -1.97
RFX1P22670 RNU6-917P-201ENST00000516294 104 ntBASIC2.73□□□□□ -1.97
RFX1P22670 MIR3152-201ENST00000579801 74 ntBASIC2.73□□□□□ -1.97
RFX1P22670 MIR4791-201ENST00000607666 84 ntBASIC2.73□□□□□ -1.97
RFX1P22670 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.73□□□□□ -1.97
RFX1P22670 AC106754.2-201ENST00000623006 233 ntBASIC2.73□□□□□ -1.97
RFX1P22670 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms