Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR4709-201ENST00000577272 72 ntBASIC0.74□□□□□ -2.29
COL5A1P20908 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
COL5A1P20908 AL365434.2-201ENST00000607979 234 ntBASIC0.74□□□□□ -2.29
COL5A1P20908 AC090425.1-201ENST00000610007 140 ntBASIC0.74□□□□□ -2.29
COL5A1P20908 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
COL5A1P20908 SNORD45.3-201ENST00000363836 72 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 Y_RNA.199-201ENST00000364014 102 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 Y_RNA.634-201ENST00000364811 113 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 SNORA25.8-201ENST00000364831 128 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU6-514P-201ENST00000384208 107 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 Y_RNA.478-201ENST00000384358 107 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 AL606845.1-201ENST00000404881 255 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU6-1135P-201ENST00000411083 103 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 HSPE1P9-201ENST00000440046 311 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 AC079140.2-201ENST00000506193 142 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 SNORD116-28-201ENST00000516123 91 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU6-229P-201ENST00000516614 102 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 MIR4422-201ENST00000581938 83 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 SNORA28-201ENST00000606769 126 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 AC006441.5-201ENST00000612680 209 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU6-200P-201ENST00000364743 107 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 SNORA4.2-201ENST00000365313 147 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 Y_RNA.412-201ENST00000384001 104 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU6-1289P-201ENST00000384431 106 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU6-296P-201ENST00000384608 107 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 Y_RNA.552-201ENST00000384665 112 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 SNORA48.1-201ENST00000390879 135 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNA5SP496-201ENST00000391240 109 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 U8.16-201ENST00000391279 133 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 MRPL35P3-201ENST00000421557 364 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RPS27P16-201ENST00000425758 201 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 SNRPGP8-201ENST00000454064 226 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 Y_RNA.662-201ENST00000516028 97 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU7-12P-201ENST00000516030 62 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 AC109810.1-201ENST00000534066 224 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 MRPS18CP4-201ENST00000535821 231 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 DEFB117-201ENST00000602356 141 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 RNU2-4P-201ENST00000606190 192 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 Y_RNA.802-201ENST00000614892 130 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 AC078938.1-201ENST00000620993 318 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 AL513423.1-201ENST00000621695 132 ntBASIC0.73□□□□□ -2.29
COL5A1P20908 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
COL5A1P20908 Y_RNA.229-201ENST00000364347 113 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 SNORD50B-201ENST00000364995 70 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 RNU6-47P-201ENST00000383866 107 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 MIR526A2-201ENST00000390198 65 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
COL5A1P20908 RNU6-918P-201ENST00000391219 106 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 MIR548O-201ENST00000408583 114 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 AC233266.1-201ENST00000454518 96 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 RN7SKP164-201ENST00000516138 266 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 RNU6-861P-201ENST00000516745 106 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 RNA5SP481-201ENST00000516814 122 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 RNU2-56P-201ENST00000516826 190 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 RNU6-365P-201ENST00000517113 106 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.72□□□□□ -2.29
COL5A1P20908 AL049861.1-201ENST00000603130 150 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 AC120024.3-201ENST00000603167 156 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 AP001485.1-201ENST00000604799 199 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 AC242852.1-201ENST00000612151 96 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 AC004792.1-201ENST00000614523 137 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 AC244015.1-201ENST00000622301 99 ntBASIC0.72□□□□□ -2.29
COL5A1P20908 Y_RNA.297-201ENST00000364950 91 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 Y_RNA.370-201ENST00000365589 108 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 Y_RNA.571-201ENST00000384753 98 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6-1031P-201ENST00000384773 107 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 MIR522-201ENST00000385071 87 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 MIR30A-201ENST00000385092 71 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 MIR616-201ENST00000385293 97 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6-578P-201ENST00000390980 103 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNA5SP109-201ENST00000391010 116 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6-381P-201ENST00000391259 108 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.71□□□□□ -2.3
COL5A1P20908 SNRPGP10-201ENST00000432323 225 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 SNRPGP14-201ENST00000435400 219 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 AC245047.8-201ENST00000456455 284 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU7-34P-201ENST00000459394 64 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNA5SP57-201ENST00000459463 123 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6-138P-201ENST00000515952 107 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNA5SP168-201ENST00000516642 112 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 MIR4308-201ENST00000580634 81 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 AC072026.1-201ENST00000605023 201 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
COL5A1P20908 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
COL5A1P20908 Y_RNA.23-201ENST00000362496 106 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6-682P-201ENST00000363843 106 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6-818P-201ENST00000364837 108 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU6-163P-201ENST00000384396 106 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 SNORA12.1-201ENST00000390873 148 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 SNORA26-201ENST00000391286 122 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 RNU7-120P-201ENST00000459334 63 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 AC114811.1-201ENST00000507207 168 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 SNORD77.4-201ENST00000516158 81 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 AC007751.1-201ENST00000529260 376 ntBASIC0.71□□□□□ -2.3
COL5A1P20908 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.71□□□□□ -2.3
COL5A1P20908 AC243829.6-201ENST00000612652 106 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms