Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 Y_RNA.241-201ENST00000364470 117 ntBASIC1.29□□□□□ -2.2
PCNAP12004 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
PCNAP12004 Y_RNA.370-201ENST00000365589 108 ntBASIC1.29□□□□□ -2.2
PCNAP12004 RNU6-643P-201ENST00000384018 107 ntBASIC1.29□□□□□ -2.2
PCNAP12004 Y_RNA.435-201ENST00000384095 112 ntBASIC1.29□□□□□ -2.2
PCNAP12004 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.29□□□□□ -2.2
PCNAP12004 AC006461.1-201ENST00000412637 326 ntBASIC1.29□□□□□ -2.2
PCNAP12004 AL138752.1-201ENST00000452964 351 ntBASIC1.29□□□□□ -2.2
PCNAP12004 RNU6-126P-201ENST00000516685 103 ntBASIC1.29□□□□□ -2.2
PCNAP12004 RNU6-861P-201ENST00000516745 106 ntBASIC1.29□□□□□ -2.2
PCNAP12004 MIR3129-201ENST00000581095 76 ntBASIC1.29□□□□□ -2.2
PCNAP12004 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
PCNAP12004 MIR376A2-201ENST00000636782 80 ntBASIC1.29□□□□□ -2.2
PCNAP12004 Y_RNA.363-201ENST00000365529 113 ntBASIC1.28□□□□□ -2.2
PCNAP12004 RNU6-1336P-201ENST00000383886 109 ntBASIC1.28□□□□□ -2.2
PCNAP12004 SEPT7P4-201ENST00000437076 306 ntBASIC1.28□□□□□ -2.2
PCNAP12004 SNORA81.3-201ENST00000517283 198 ntBASIC1.28□□□□□ -2.2
PCNAP12004 MRPS18CP4-201ENST00000535821 231 ntBASIC1.28□□□□□ -2.2
PCNAP12004 MIR3671-201ENST00000580455 88 ntBASIC1.28□□□□□ -2.2
PCNAP12004 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
PCNAP12004 MIR6715A-201ENST00000615929 79 ntBASIC1.28□□□□□ -2.2
PCNAP12004 RNU6-978P-201ENST00000364371 103 ntBASIC1.27□□□□□ -2.21
PCNAP12004 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
PCNAP12004 SNORD77.3-201ENST00000391113 65 ntBASIC1.27□□□□□ -2.21
PCNAP12004 RNU4-62P-201ENST00000410125 130 ntBASIC1.27□□□□□ -2.21
PCNAP12004 RNU6-847P-201ENST00000411115 108 ntBASIC1.27□□□□□ -2.21
PCNAP12004 AC245047.7-201ENST00000440265 293 ntBASIC1.27□□□□□ -2.21
PCNAP12004 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
PCNAP12004 SNORA18.4-201ENST00000516440 124 ntBASIC1.27□□□□□ -2.21
PCNAP12004 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
PCNAP12004 AP003484.1-201ENST00000530974 250 ntBASIC1.27□□□□□ -2.21
PCNAP12004 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
PCNAP12004 MIR378D2-201ENST00000580636 98 ntBASIC1.27□□□□□ -2.21
PCNAP12004 MIR4298-201ENST00000584380 73 ntBASIC1.27□□□□□ -2.21
PCNAP12004 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
PCNAP12004 MIR4251-201ENST00000635819 61 ntBASIC1.27□□□□□ -2.21
PCNAP12004 Y_RNA.29-201ENST00000362570 113 ntBASIC1.26□□□□□ -2.21
PCNAP12004 RNU6-682P-201ENST00000363843 106 ntBASIC1.26□□□□□ -2.21
PCNAP12004 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
PCNAP12004 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
PCNAP12004 RPS26P48-201ENST00000491713 339 ntBASIC1.26□□□□□ -2.21
PCNAP12004 AL133373.1-201ENST00000497098 94 ntBASIC1.26□□□□□ -2.21
PCNAP12004 AC074198.2-201ENST00000508153 258 ntBASIC1.26□□□□□ -2.21
PCNAP12004 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
PCNAP12004 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.26□□□□□ -2.21
PCNAP12004 AC072026.1-201ENST00000605023 201 ntBASIC1.26□□□□□ -2.21
PCNAP12004 MIR4791-201ENST00000607666 84 ntBASIC1.26□□□□□ -2.21
PCNAP12004 AC004792.1-201ENST00000614523 137 ntBASIC1.26□□□□□ -2.21
PCNAP12004 AC134878.1-201ENST00000619901 243 ntBASIC1.26□□□□□ -2.21
PCNAP12004 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
PCNAP12004 SNORA1.2-201ENST00000365189 134 ntBASIC1.25□□□□□ -2.21
PCNAP12004 SNORA51.10-201ENST00000384418 136 ntBASIC1.25□□□□□ -2.21
PCNAP12004 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
PCNAP12004 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
PCNAP12004 RNU5E-9P-201ENST00000411164 104 ntBASIC1.25□□□□□ -2.21
PCNAP12004 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
PCNAP12004 RNU2-13P-201ENST00000515909 113 ntBASIC1.25□□□□□ -2.21
PCNAP12004 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
PCNAP12004 AC243994.1-201ENST00000618627 109 ntBASIC1.25□□□□□ -2.21
PCNAP12004 MTND1P7-201ENST00000632801 297 ntBASIC1.25□□□□□ -2.21
PCNAP12004 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
PCNAP12004 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-34-201ENST00000362441 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-12-201ENST00000362583 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-29-201ENST00000362834 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-9-201ENST00000362912 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-21-201ENST00000362963 81 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-14-201ENST00000363090 81 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-13-201ENST00000363358 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 Y_RNA.140-201ENST00000363474 103 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-41-201ENST00000363608 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-11-201ENST00000363616 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-5-201ENST00000363633 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-39-201ENST00000363694 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-4-201ENST00000363810 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-16-201ENST00000363887 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-6-201ENST00000363942 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-42-201ENST00000364273 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-15-201ENST00000364809 81 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-1-201ENST00000364961 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-26-201ENST00000365067 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-10-201ENST00000365073 81 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-43-201ENST00000365503 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-36-201ENST00000365629 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
PCNAP12004 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
PCNAP12004 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.24□□□□□ -2.21
PCNAP12004 AC108667.1-201ENST00000428618 249 ntBASIC1.24□□□□□ -2.21
PCNAP12004 AC087499.4-201ENST00000448505 178 ntBASIC1.24□□□□□ -2.21
PCNAP12004 RNU7-120P-201ENST00000459334 63 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD116-25-201ENST00000516517 92 ntBASIC1.24□□□□□ -2.21
PCNAP12004 MIR4431-201ENST00000579990 94 ntBASIC1.24□□□□□ -2.21
PCNAP12004 MIR4524B-201ENST00000581569 115 ntBASIC1.24□□□□□ -2.21
PCNAP12004 AC104984.5-201ENST00000586878 94 ntBASIC1.24□□□□□ -2.21
PCNAP12004 SNORD115-40-201ENST00000606510 82 ntBASIC1.24□□□□□ -2.21
PCNAP12004 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
PCNAP12004 RNA5SP264-201ENST00000363115 107 ntBASIC1.23□□□□□ -2.21
PCNAP12004 Y_RNA.785-201ENST00000384290 109 ntBASIC1.23□□□□□ -2.21
PCNAP12004 SNORA27-201ENST00000384323 126 ntBASIC1.23□□□□□ -2.21
PCNAP12004 MIR1185-1-201ENST00000408598 86 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms