Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SNORD115-41-201ENST00000363608 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-11-201ENST00000363616 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-5-201ENST00000363633 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-39-201ENST00000363694 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-4-201ENST00000363810 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-16-201ENST00000363887 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-6-201ENST00000363942 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 Y_RNA.197-201ENST00000364004 102 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-42-201ENST00000364273 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-15-201ENST00000364809 81 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-1-201ENST00000364961 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-26-201ENST00000365067 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-10-201ENST00000365073 81 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 RNU6-1138P-201ENST00000365359 106 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-43-201ENST00000365503 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-36-201ENST00000365629 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CAPN1P07384 RNU6-913P-201ENST00000390913 95 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 RNU6-1009P-201ENST00000390996 107 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 MTCO1P5-201ENST00000433573 344 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 AC023449.1-201ENST00000454464 154 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.29□□□□□ -2.36
CAPN1P07384 RNU7-56P-201ENST00000458744 62 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 RNU7-67P-201ENST00000459003 62 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 RNU6-397P-201ENST00000516226 104 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 Y_RNA.715-201ENST00000517082 110 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.29□□□□□ -2.36
CAPN1P07384 AL049861.1-201ENST00000603130 150 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 AP000942.4-201ENST00000604811 241 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 SNORD115-40-201ENST00000606510 82 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 MIR6740-201ENST00000618268 113 ntBASIC0.29□□□□□ -2.36
CAPN1P07384 RNA5SP457-201ENST00000363657 124 ntBASIC0.28□□□□□ -2.36
CAPN1P07384 RNU6-938P-201ENST00000411285 103 ntBASIC0.28□□□□□ -2.36
CAPN1P07384 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.28□□□□□ -2.36
CAPN1P07384 RNU6-958P-201ENST00000516995 106 ntBASIC0.28□□□□□ -2.36
CAPN1P07384 AL355297.3-201ENST00000604082 446 ntBASIC0.28□□□□□ -2.36
CAPN1P07384 AC013791.1-201ENST00000616619 62 ntBASIC0.28□□□□□ -2.36
CAPN1P07384 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
CAPN1P07384 AC010332.2-201ENST00000613083 1904 ntBASIC0.28□□□□□ -2.36
CAPN1P07384 Y_RNA.115-201ENST00000363272 98 ntBASIC0.27□□□□□ -2.37
CAPN1P07384 Y_RNA.445-201ENST00000384168 102 ntBASIC0.27□□□□□ -2.37
CAPN1P07384 MIR1197-201ENST00000408818 88 ntBASIC0.27□□□□□ -2.37
CAPN1P07384 Y_RNA.639-201ENST00000458981 102 ntBASIC0.27□□□□□ -2.37
CAPN1P07384 uc_338.22-201ENST00000622722 187 ntBASIC0.27□□□□□ -2.37
CAPN1P07384 RNU4-90P-201ENST00000362773 141 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 SNORD115-28-201ENST00000363931 81 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 SNORA63C-201ENST00000364578 129 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 Y_RNA.486-201ENST00000384398 107 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 Y_RNA.569-201ENST00000384749 103 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 MIR548A2-201ENST00000384956 97 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 SNORD115-46-201ENST00000390982 71 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 Y_RNA.587-201ENST00000391210 103 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 RNA5SP496-201ENST00000391240 109 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 SNORD71-201ENST00000411292 86 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 HMGN1P33-201ENST00000432945 451 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.26□□□□□ -2.37
CAPN1P07384 RNU7-73P-201ENST00000458743 63 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 SNORD77.4-201ENST00000516158 81 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 AC008608.1-201ENST00000603910 127 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 RAC1P9-201ENST00000604990 392 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.26□□□□□ -2.37
CAPN1P07384 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 Z97988.1-201ENST00000637697 135 ntBASIC0.26□□□□□ -2.37
CAPN1P07384 MIR367-201ENST00000362299 68 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 Y_RNA.14-201ENST00000362415 103 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 RNU6-1272P-201ENST00000362776 107 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 Y_RNA.105-201ENST00000363182 111 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 Y_RNA.183-201ENST00000363882 113 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 Y_RNA.424-201ENST00000384063 103 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 MIR518F-201ENST00000384973 87 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 Y_RNA.645-201ENST00000391229 102 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 MTND4P19-201ENST00000446659 478 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 AC087499.4-201ENST00000448505 178 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 AC082651.2-201ENST00000496833 166 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 RNU6-897P-201ENST00000517135 105 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.25□□□□□ -2.37
CAPN1P07384 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 MIR4795-201ENST00000584182 89 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 AC124312.5-201ENST00000604451 268 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 MIR8055-201ENST00000610739 97 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 MIR2909-201ENST00000617113 69 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
CAPN1P07384 MIR103A1-201ENST00000362165 78 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 RNA5SP517-201ENST00000364724 117 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 SNORA63.7-201ENST00000365579 123 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CAPN1P07384 Y_RNA.395-201ENST00000383945 109 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 SNORD38B-201ENST00000384690 67 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 MIR588-201ENST00000384900 83 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 RNU6-679P-201ENST00000391003 106 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 Y_RNA.581-201ENST00000391017 97 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 SNORA40.5-201ENST00000391061 128 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 SNORD100-201ENST00000408573 76 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.24□□□□□ -2.37
CAPN1P07384 MTND5P20-201ENST00000448677 143 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 MTND3P22-201ENST00000510932 243 ntBASIC0.24□□□□□ -2.37
CAPN1P07384 SNORD36C-201ENST00000516733 66 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms