Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 Y_RNA.258-201ENST00000364613 105 ntBASIC0.71□□□□□ -2.3
MMP1P03956 RNU6-740P-201ENST00000364734 105 ntBASIC0.71□□□□□ -2.3
MMP1P03956 Y_RNA.293-201ENST00000364908 93 ntBASIC0.71□□□□□ -2.3
MMP1P03956 RNU6-1138P-201ENST00000365359 106 ntBASIC0.71□□□□□ -2.3
MMP1P03956 Y_RNA.483-201ENST00000384380 101 ntBASIC0.71□□□□□ -2.3
MMP1P03956 MIR606-201ENST00000384851 96 ntBASIC0.71□□□□□ -2.3
MMP1P03956 MIR526A2-201ENST00000390198 65 ntBASIC0.71□□□□□ -2.3
MMP1P03956 RNA5SP496-201ENST00000391240 109 ntBASIC0.71□□□□□ -2.3
MMP1P03956 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
MMP1P03956 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
MMP1P03956 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.71□□□□□ -2.3
MMP1P03956 AL392103.1-201ENST00000447000 198 ntBASIC0.71□□□□□ -2.3
MMP1P03956 RNU7-25P-201ENST00000516544 62 ntBASIC0.71□□□□□ -2.3
MMP1P03956 AC007751.1-201ENST00000529260 376 ntBASIC0.71□□□□□ -2.3
MMP1P03956 MIR4724-201ENST00000579485 89 ntBASIC0.71□□□□□ -2.3
MMP1P03956 Y_RNA.812-201ENST00000610788 101 ntBASIC0.71□□□□□ -2.3
MMP1P03956 Y_RNA.784-201ENST00000613803 101 ntBASIC0.71□□□□□ -2.3
MMP1P03956 Y_RNA.787-201ENST00000616522 101 ntBASIC0.71□□□□□ -2.3
MMP1P03956 Y_RNA.780-201ENST00000617336 101 ntBASIC0.71□□□□□ -2.3
MMP1P03956 Y_RNA.801-201ENST00000619005 101 ntBASIC0.71□□□□□ -2.3
MMP1P03956 AC015726.2-201ENST00000620112 122 ntBASIC0.71□□□□□ -2.3
MMP1P03956 MIR8062-201ENST00000621515 85 ntBASIC0.71□□□□□ -2.3
MMP1P03956 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.71□□□□□ -2.3
MMP1P03956 MIR103A2-201ENST00000362154 78 ntBASIC0.7□□□□□ -2.3
MMP1P03956 MIR367-201ENST00000362299 68 ntBASIC0.7□□□□□ -2.3
MMP1P03956 Y_RNA.486-201ENST00000384398 107 ntBASIC0.7□□□□□ -2.3
MMP1P03956 RNU6-738P-201ENST00000384531 106 ntBASIC0.7□□□□□ -2.3
MMP1P03956 Y_RNA.547-201ENST00000384654 119 ntBASIC0.7□□□□□ -2.3
MMP1P03956 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
MMP1P03956 SNORD2.1-201ENST00000458762 69 ntBASIC0.7□□□□□ -2.3
MMP1P03956 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
MMP1P03956 RNU2-13P-201ENST00000515909 113 ntBASIC0.7□□□□□ -2.3
MMP1P03956 SNORD77.4-201ENST00000516158 81 ntBASIC0.7□□□□□ -2.3
MMP1P03956 RNA5SP255-201ENST00000516370 107 ntBASIC0.7□□□□□ -2.3
MMP1P03956 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
MMP1P03956 AC006504.6-201ENST00000590142 199 ntBASIC0.7□□□□□ -2.3
MMP1P03956 U2.14-201ENST00000615943 113 ntBASIC0.7□□□□□ -2.3
MMP1P03956 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
MMP1P03956 MIR335-201ENST00000362173 94 ntBASIC0.69□□□□□ -2.3
MMP1P03956 Y_RNA.44-201ENST00000362676 108 ntBASIC0.69□□□□□ -2.3
MMP1P03956 RNU6-238P-201ENST00000363313 106 ntBASIC0.69□□□□□ -2.3
MMP1P03956 RNA5SP48-201ENST00000363969 126 ntBASIC0.69□□□□□ -2.3
MMP1P03956 Y_RNA.494-201ENST00000384432 111 ntBASIC0.69□□□□□ -2.3
MMP1P03956 Y_RNA.574-201ENST00000384766 95 ntBASIC0.69□□□□□ -2.3
MMP1P03956 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
MMP1P03956 MIR802-201ENST00000390235 94 ntBASIC0.69□□□□□ -2.3
MMP1P03956 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
MMP1P03956 Y_RNA.666-201ENST00000516187 112 ntBASIC0.69□□□□□ -2.3
MMP1P03956 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.69□□□□□ -2.3
MMP1P03956 AC100767.1-201ENST00000528178 123 ntBASIC0.69□□□□□ -2.3
MMP1P03956 AL117187.1-201ENST00000555482 181 ntBASIC0.69□□□□□ -2.3
MMP1P03956 SEPT14P17-201ENST00000617978 177 ntBASIC0.69□□□□□ -2.3
MMP1P03956 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
MMP1P03956 MIR4251-201ENST00000635819 61 ntBASIC0.69□□□□□ -2.3
MMP1P03956 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
MMP1P03956 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.14-201ENST00000362415 103 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.24-201ENST00000362508 103 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.82-201ENST00000363000 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.92-201ENST00000363043 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 SNORA63-201ENST00000363450 132 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.145-201ENST00000363527 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.229-201ENST00000364347 113 ntBASIC0.68□□□□□ -2.3
MMP1P03956 RNU6-654P-201ENST00000364373 107 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.235-201ENST00000364412 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.306-201ENST00000365015 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.312-201ENST00000365089 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.322-201ENST00000365151 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.396-201ENST00000383949 103 ntBASIC0.68□□□□□ -2.3
MMP1P03956 MIR548A2-201ENST00000384956 97 ntBASIC0.68□□□□□ -2.3
MMP1P03956 MIR626-201ENST00000385032 94 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.587-201ENST00000391210 103 ntBASIC0.68□□□□□ -2.3
MMP1P03956 MIR548O-201ENST00000408583 114 ntBASIC0.68□□□□□ -2.3
MMP1P03956 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.650-201ENST00000459002 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.68□□□□□ -2.3
MMP1P03956 RNU6-1007P-201ENST00000516586 107 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.777-201ENST00000516982 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 MIR4643-201ENST00000577473 78 ntBASIC0.68□□□□□ -2.3
MMP1P03956 AC131055.1-201ENST00000584626 316 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.771-201ENST00000598668 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 AC008737.2-201ENST00000599446 118 ntBASIC0.68□□□□□ -2.3
MMP1P03956 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.802-201ENST00000614892 130 ntBASIC0.68□□□□□ -2.3
MMP1P03956 Y_RNA.789-201ENST00000622480 102 ntBASIC0.68□□□□□ -2.3
MMP1P03956 MIR330-201ENST00000362196 94 ntBASIC0.67□□□□□ -2.3
MMP1P03956 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
MMP1P03956 Y_RNA.461-201ENST00000384263 103 ntBASIC0.67□□□□□ -2.3
MMP1P03956 RNU6-713P-201ENST00000384761 107 ntBASIC0.67□□□□□ -2.3
MMP1P03956 RNU6-938P-201ENST00000411285 103 ntBASIC0.67□□□□□ -2.3
MMP1P03956 AL358176.2-201ENST00000425769 204 ntBASIC0.67□□□□□ -2.3
MMP1P03956 AC092628.1-201ENST00000436250 252 ntBASIC0.67□□□□□ -2.3
MMP1P03956 FABP5P4-201ENST00000437203 171 ntBASIC0.67□□□□□ -2.3
MMP1P03956 SCARNA8-201ENST00000515924 131 ntBASIC0.67□□□□□ -2.3
MMP1P03956 AP003484.1-201ENST00000530974 250 ntBASIC0.67□□□□□ -2.3
MMP1P03956 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.67□□□□□ -2.3
MMP1P03956 MIR5688-201ENST00000580619 83 ntBASIC0.67□□□□□ -2.3
MMP1P03956 MIR4282-201ENST00000583613 67 ntBASIC0.67□□□□□ -2.3
MMP1P03956 MIR4791-201ENST00000607666 84 ntBASIC0.67□□□□□ -2.3
MMP1P03956 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms