Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 MIR548O-201ENST00000408583 114 ntBASIC1.21□□□□□ -2.22
NGFP01138 SNORD123-201ENST00000459473 70 ntBASIC1.21□□□□□ -2.22
NGFP01138 RNA5SP61-201ENST00000516453 100 ntBASIC1.21□□□□□ -2.22
NGFP01138 RNU7-25P-201ENST00000516544 62 ntBASIC1.21□□□□□ -2.22
NGFP01138 RNU6-182P-201ENST00000516970 105 ntBASIC1.21□□□□□ -2.22
NGFP01138 AC019176.1-201ENST00000518519 225 ntBASIC1.21□□□□□ -2.22
NGFP01138 AC022559.1-201ENST00000520905 205 ntBASIC1.21□□□□□ -2.22
NGFP01138 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
NGFP01138 MIR4431-201ENST00000579990 94 ntBASIC1.21□□□□□ -2.22
NGFP01138 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
NGFP01138 AL357312.1-201ENST00000603879 298 ntBASIC1.21□□□□□ -2.22
NGFP01138 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
NGFP01138 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
NGFP01138 RNU6-643P-201ENST00000384018 107 ntBASIC1.2□□□□□ -2.22
NGFP01138 MIR518E-201ENST00000385252 88 ntBASIC1.2□□□□□ -2.22
NGFP01138 U8.17-201ENST00000391292 132 ntBASIC1.2□□□□□ -2.22
NGFP01138 SNORA79-201ENST00000408376 140 ntBASIC1.2□□□□□ -2.22
NGFP01138 AC087499.4-201ENST00000448505 178 ntBASIC1.2□□□□□ -2.22
NGFP01138 RNU6-970P-201ENST00000516312 107 ntBASIC1.2□□□□□ -2.22
NGFP01138 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
NGFP01138 MIR378D2-201ENST00000580636 98 ntBASIC1.2□□□□□ -2.22
NGFP01138 MIR7111-201ENST00000619751 72 ntBASIC1.2□□□□□ -2.22
NGFP01138 AL121890.5-201ENST00000620848 304 ntBASIC1.2□□□□□ -2.22
NGFP01138 Y_RNA.116-201ENST00000363292 103 ntBASIC1.19□□□□□ -2.22
NGFP01138 RNU6-978P-201ENST00000364371 103 ntBASIC1.19□□□□□ -2.22
NGFP01138 Y_RNA.441-201ENST00000384123 112 ntBASIC1.19□□□□□ -2.22
NGFP01138 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
NGFP01138 RNU2-13P-201ENST00000515909 113 ntBASIC1.19□□□□□ -2.22
NGFP01138 RNU6-693P-201ENST00000516134 107 ntBASIC1.19□□□□□ -2.22
NGFP01138 RNU7-43P-201ENST00000516554 64 ntBASIC1.19□□□□□ -2.22
NGFP01138 SNORA18.7-201ENST00000516910 131 ntBASIC1.19□□□□□ -2.22
NGFP01138 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
NGFP01138 FTX_2.1-201ENST00000618816 94 ntBASIC1.19□□□□□ -2.22
NGFP01138 AC015726.2-201ENST00000620112 122 ntBASIC1.19□□□□□ -2.22
NGFP01138 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NGFP01138 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NGFP01138 SNORD115-28-201ENST00000363931 81 ntBASIC1.18□□□□□ -2.22
NGFP01138 Y_RNA.355-201ENST00000365462 98 ntBASIC1.18□□□□□ -2.22
NGFP01138 Y_RNA.542-201ENST00000384641 111 ntBASIC1.18□□□□□ -2.22
NGFP01138 RNU6-955P-201ENST00000410497 104 ntBASIC1.18□□□□□ -2.22
NGFP01138 RNU6-938P-201ENST00000411285 103 ntBASIC1.18□□□□□ -2.22
NGFP01138 MTND5P15-201ENST00000434246 349 ntBASIC1.18□□□□□ -2.22
NGFP01138 RNU7-121P-201ENST00000516604 62 ntBASIC1.18□□□□□ -2.22
NGFP01138 RNU6-861P-201ENST00000516745 106 ntBASIC1.18□□□□□ -2.22
NGFP01138 RNU6-165P-201ENST00000517170 99 ntBASIC1.18□□□□□ -2.22
NGFP01138 MIR548AR-201ENST00000582191 57 ntBASIC1.18□□□□□ -2.22
NGFP01138 AL365205.2-201ENST00000594586 68 ntBASIC1.18□□□□□ -2.22
NGFP01138 AC134878.1-201ENST00000619901 243 ntBASIC1.18□□□□□ -2.22
NGFP01138 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.18□□□□□ -2.22
NGFP01138 Y_RNA.37-201ENST00000362606 108 ntBASIC1.17□□□□□ -2.22
NGFP01138 Y_RNA.118-201ENST00000363300 101 ntBASIC1.17□□□□□ -2.22
NGFP01138 RNU6-597P-201ENST00000365620 102 ntBASIC1.17□□□□□ -2.22
NGFP01138 RNU6-1292P-201ENST00000383856 107 ntBASIC1.17□□□□□ -2.22
NGFP01138 Y_RNA.410-201ENST00000383992 113 ntBASIC1.17□□□□□ -2.22
NGFP01138 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
NGFP01138 RNU6-907P-201ENST00000390924 102 ntBASIC1.17□□□□□ -2.22
NGFP01138 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.17□□□□□ -2.22
NGFP01138 SNORD116-25-201ENST00000516517 92 ntBASIC1.17□□□□□ -2.22
NGFP01138 MIR4764-201ENST00000580680 88 ntBASIC1.17□□□□□ -2.22
NGFP01138 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
NGFP01138 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
NGFP01138 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
NGFP01138 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NGFP01138 SNORA1.2-201ENST00000365189 134 ntBASIC1.16□□□□□ -2.22
NGFP01138 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.16□□□□□ -2.22
NGFP01138 SNORD28B-201ENST00000390993 75 ntBASIC1.16□□□□□ -2.22
NGFP01138 MIR1276-201ENST00000408707 83 ntBASIC1.16□□□□□ -2.22
NGFP01138 RNU6-1054P-201ENST00000411293 104 ntBASIC1.16□□□□□ -2.22
NGFP01138 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.16□□□□□ -2.22
NGFP01138 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.16□□□□□ -2.22
NGFP01138 AF228730.3-201ENST00000436691 102 ntBASIC1.16□□□□□ -2.22
NGFP01138 Y_RNA.662-201ENST00000516028 97 ntBASIC1.16□□□□□ -2.22
NGFP01138 RNU6-1270P-201ENST00000517128 108 ntBASIC1.16□□□□□ -2.22
NGFP01138 MIR3668-201ENST00000582138 75 ntBASIC1.16□□□□□ -2.22
NGFP01138 AC098479.1-201ENST00000609225 154 ntBASIC1.16□□□□□ -2.22
NGFP01138 AL096861.1-201ENST00000610899 123 ntBASIC1.16□□□□□ -2.22
NGFP01138 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
NGFP01138 SNORD115-34-201ENST00000362441 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-12-201ENST00000362583 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-29-201ENST00000362834 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-9-201ENST00000362912 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-21-201ENST00000362963 81 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-14-201ENST00000363090 81 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-13-201ENST00000363358 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-41-201ENST00000363608 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-11-201ENST00000363616 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-5-201ENST00000363633 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-39-201ENST00000363694 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-4-201ENST00000363810 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-16-201ENST00000363887 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-6-201ENST00000363942 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 RNU4-84P-201ENST00000364200 139 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-42-201ENST00000364273 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 Y_RNA.224-201ENST00000364308 111 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-15-201ENST00000364809 81 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-1-201ENST00000364961 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-26-201ENST00000365067 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-10-201ENST00000365073 81 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-43-201ENST00000365503 82 ntBASIC1.15□□□□□ -2.23
NGFP01138 SNORD115-36-201ENST00000365629 82 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms