Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC021753.1-201ENST00000635724 168 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RAPGEF3O95398 Y_RNA.66-201ENST00000362862 102 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 SNORD114-27-201ENST00000363766 70 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 RNU6-268P-201ENST00000364174 107 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 Y_RNA.393-201ENST00000383936 102 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 SNORD38C-201ENST00000384381 69 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 MIR194-1-201ENST00000384892 85 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RAPGEF3O95398 SNRPGP13-201ENST00000442212 177 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 MIR6078-201ENST00000611069 100 ntBASIC2.22□□□□□ -2.05
RAPGEF3O95398 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RAPGEF3O95398 RNU6-888P-201ENST00000363010 101 ntBASIC2.21□□□□□ -2.06
RAPGEF3O95398 RNU6-978P-201ENST00000364371 103 ntBASIC2.21□□□□□ -2.06
RAPGEF3O95398 RNY1P5-201ENST00000383890 115 ntBASIC2.21□□□□□ -2.06
RAPGEF3O95398 MIR452-201ENST00000385020 85 ntBASIC2.21□□□□□ -2.06
RAPGEF3O95398 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
RAPGEF3O95398 MIR6767-201ENST00000637302 66 ntBASIC2.21□□□□□ -2.06
RAPGEF3O95398 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.21□□□□□ -2.06
RAPGEF3O95398 AL442644.1-201ENST00000454390 3105 ntBASIC2.2□□□□□ -2.06
RAPGEF3O95398 Y_RNA.170-201ENST00000363746 110 ntBASIC2.2□□□□□ -2.06
RAPGEF3O95398 Y_RNA.398-201ENST00000383952 99 ntBASIC2.2□□□□□ -2.06
RAPGEF3O95398 SNORD116-18-201ENST00000383961 92 ntBASIC2.2□□□□□ -2.06
RAPGEF3O95398 AL161935.2-201ENST00000414627 60 ntBASIC2.2□□□□□ -2.06
RAPGEF3O95398 Y_RNA.666-201ENST00000516187 112 ntBASIC2.2□□□□□ -2.06
RAPGEF3O95398 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.2□□□□□ -2.06
RAPGEF3O95398 Y_RNA.8-201ENST00000362353 102 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 SNORA25.7-201ENST00000364375 127 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 RNU6-203P-201ENST00000384038 104 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 RNU6-746P-201ENST00000384112 109 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 AL603908.1-201ENST00000406098 201 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 RNU7-200P-201ENST00000516105 62 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 RNU6-830P-201ENST00000516353 107 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 FAM106DP-201ENST00000586416 501 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.19□□□□□ -2.06
RAPGEF3O95398 MIR8074-201ENST00000615081 81 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 Y_RNA.778-201ENST00000620203 90 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
RAPGEF3O95398 RNU6-1130P-201ENST00000365434 107 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 SNORD61-201ENST00000384252 73 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 Y_RNA.542-201ENST00000384641 111 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RAPGEF3O95398 MIR1267-201ENST00000408723 78 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 RNU2-40P-201ENST00000410833 196 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 RNU6-693P-201ENST00000516134 107 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 AC090142.3-201ENST00000519012 385 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 MIR6844-201ENST00000637122 62 ntBASIC2.18□□□□□ -2.06
RAPGEF3O95398 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
RAPGEF3O95398 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RAPGEF3O95398 RNU6-768P-201ENST00000384683 107 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 SUMO2P12-201ENST00000405924 140 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 MIR548M-201ENST00000408260 86 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 MIR548O-201ENST00000408583 114 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 AC015922.2-201ENST00000435593 184 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 RNA5SP436-201ENST00000516020 115 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.17□□□□□ -2.06
RAPGEF3O95398 AL365205.2-201ENST00000594586 68 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 AC103810.8-201ENST00000607347 118 ntBASIC2.17□□□□□ -2.06
RAPGEF3O95398 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RAPGEF3O95398 RNU6-199P-201ENST00000362954 107 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 Y_RNA.400-201ENST00000383963 111 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 RNU6-439P-201ENST00000384188 106 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 SNORA75.5-201ENST00000391291 81 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.16□□□□□ -2.06
RAPGEF3O95398 Y_RNA.703-201ENST00000516846 111 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 MTND5P41-201ENST00000517498 206 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 AC007751.1-201ENST00000529260 376 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 MIR3935-201ENST00000583472 104 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RAPGEF3O95398 MIR6788-201ENST00000618842 66 ntBASIC2.16□□□□□ -2.06
RAPGEF3O95398 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
RAPGEF3O95398 RNU6-151P-201ENST00000364158 107 ntBASIC2.15□□□□□ -2.07
RAPGEF3O95398 RNU6-1292P-201ENST00000383856 107 ntBASIC2.15□□□□□ -2.07
RAPGEF3O95398 MIR548J-201ENST00000408833 112 ntBASIC2.15□□□□□ -2.07
RAPGEF3O95398 AC093850.1-201ENST00000454121 251 ntBASIC2.15□□□□□ -2.07
RAPGEF3O95398 MIR4778-201ENST00000577635 80 ntBASIC2.15□□□□□ -2.07
RAPGEF3O95398 MIR3198-2-201ENST00000577868 80 ntBASIC2.15□□□□□ -2.07
RAPGEF3O95398 Y_RNA.506-201ENST00000384494 102 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 Y_RNA.547-201ENST00000384654 119 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 MIR518F-201ENST00000384973 87 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 MIR136-201ENST00000385207 82 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 SNORD37.2-201ENST00000391075 66 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 MIR1304-201ENST00000408243 91 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.14□□□□□ -2.07
RAPGEF3O95398 RNU6-1270P-201ENST00000517128 108 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 SNORA77B-201ENST00000578179 125 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 MIR151B-201ENST00000584249 96 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 AL365434.2-201ENST00000607979 234 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 AC134878.1-201ENST00000619901 243 ntBASIC2.14□□□□□ -2.07
RAPGEF3O95398 SNORD115-28-201ENST00000363931 81 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 Y_RNA.410-201ENST00000383992 113 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 MIR548A2-201ENST00000384956 97 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 MIR30A-201ENST00000385092 71 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 SUMO1P3-201ENST00000439961 304 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 AC087499.4-201ENST00000448505 178 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 RNU7-25P-201ENST00000516544 62 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 AC015726.2-201ENST00000620112 122 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 AC095038.3-201ENST00000634439 195 ntBASIC2.13□□□□□ -2.07
RAPGEF3O95398 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms