Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 Y_RNA.241-201ENST00000364470 117 ntBASIC0.93□□□□□ -2.26
MBD4O95243 Y_RNA.376-201ENST00000365638 108 ntBASIC0.93□□□□□ -2.26
MBD4O95243 RNU6-211P-201ENST00000384047 107 ntBASIC0.93□□□□□ -2.26
MBD4O95243 RNU6-1289P-201ENST00000384431 106 ntBASIC0.93□□□□□ -2.26
MBD4O95243 SNORD89-201ENST00000390981 114 ntBASIC0.93□□□□□ -2.26
MBD4O95243 Y_RNA.587-201ENST00000391210 103 ntBASIC0.93□□□□□ -2.26
MBD4O95243 AC004941.2-201ENST00000427009 228 ntBASIC0.93□□□□□ -2.26
MBD4O95243 snoU13.16-201ENST00000459350 104 ntBASIC0.93□□□□□ -2.26
MBD4O95243 TRBVB-201ENST00000477100 408 ntBASIC0.93□□□□□ -2.26
MBD4O95243 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.93□□□□□ -2.26
MBD4O95243 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
MBD4O95243 AL078603.1-201ENST00000603824 313 ntBASIC0.93□□□□□ -2.26
MBD4O95243 AL353765.1-201ENST00000605514 183 ntBASIC0.93□□□□□ -2.26
MBD4O95243 MIR377-201ENST00000362145 69 ntBASIC0.92□□□□□ -2.26
MBD4O95243 Y_RNA.44-201ENST00000362676 108 ntBASIC0.92□□□□□ -2.26
MBD4O95243 SNORD24-201ENST00000383884 75 ntBASIC0.92□□□□□ -2.26
MBD4O95243 SNORA24-201ENST00000384096 131 ntBASIC0.92□□□□□ -2.26
MBD4O95243 Y_RNA.486-201ENST00000384398 107 ntBASIC0.92□□□□□ -2.26
MBD4O95243 Y_RNA.512-201ENST00000384518 102 ntBASIC0.92□□□□□ -2.26
MBD4O95243 RNU6-1109P-201ENST00000391187 107 ntBASIC0.92□□□□□ -2.26
MBD4O95243 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.92□□□□□ -2.26
MBD4O95243 AL035398.1-201ENST00000430869 322 ntBASIC0.92□□□□□ -2.26
MBD4O95243 AC113410.1-201ENST00000505029 247 ntBASIC0.92□□□□□ -2.26
MBD4O95243 AC012433.1-201ENST00000588916 398 ntBASIC0.92□□□□□ -2.26
MBD4O95243 AP000753.3-201ENST00000604083 169 ntBASIC0.92□□□□□ -2.26
MBD4O95243 Y_RNA.326-201ENST00000365176 113 ntBASIC0.91□□□□□ -2.26
MBD4O95243 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
MBD4O95243 SNORA26-201ENST00000391286 122 ntBASIC0.91□□□□□ -2.26
MBD4O95243 MTATP8P1-201ENST00000467115 207 ntBASIC0.91□□□□□ -2.26
MBD4O95243 RNU6-365P-201ENST00000517113 106 ntBASIC0.91□□□□□ -2.26
MBD4O95243 RMST_2.1-201ENST00000617263 136 ntBASIC0.91□□□□□ -2.26
MBD4O95243 U6.104-201ENST00000637979 90 ntBASIC0.91□□□□□ -2.26
MBD4O95243 Y_RNA.24-201ENST00000362508 103 ntBASIC0.9□□□□□ -2.27
MBD4O95243 Y_RNA.229-201ENST00000364347 113 ntBASIC0.9□□□□□ -2.27
MBD4O95243 RNU4-10P-201ENST00000364383 140 ntBASIC0.9□□□□□ -2.27
MBD4O95243 Y_RNA.355-201ENST00000365462 98 ntBASIC0.9□□□□□ -2.27
MBD4O95243 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
MBD4O95243 RNU7-67P-201ENST00000459003 62 ntBASIC0.9□□□□□ -2.27
MBD4O95243 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
MBD4O95243 AP001282.2-201ENST00000616149 309 ntBASIC0.9□□□□□ -2.27
MBD4O95243 7SK.10-201ENST00000621414 298 ntBASIC0.9□□□□□ -2.27
MBD4O95243 Y_RNA.122-201ENST00000363331 96 ntBASIC0.89□□□□□ -2.27
MBD4O95243 Y_RNA.508-201ENST00000384502 114 ntBASIC0.89□□□□□ -2.27
MBD4O95243 MIR626-201ENST00000385032 94 ntBASIC0.89□□□□□ -2.27
MBD4O95243 SNORA40.5-201ENST00000391061 128 ntBASIC0.89□□□□□ -2.27
MBD4O95243 RNA5SP95-201ENST00000410319 137 ntBASIC0.89□□□□□ -2.27
MBD4O95243 RNU6-693P-201ENST00000516134 107 ntBASIC0.89□□□□□ -2.27
MBD4O95243 AC100767.1-201ENST00000528178 123 ntBASIC0.89□□□□□ -2.27
MBD4O95243 AC007751.1-201ENST00000529260 376 ntBASIC0.89□□□□□ -2.27
MBD4O95243 MIR4264-201ENST00000583520 66 ntBASIC0.89□□□□□ -2.27
MBD4O95243 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
MBD4O95243 AP000942.4-201ENST00000604811 241 ntBASIC0.89□□□□□ -2.27
MBD4O95243 AC104465.1-201ENST00000611365 139 ntBASIC0.89□□□□□ -2.27
MBD4O95243 U2.14-201ENST00000615943 113 ntBASIC0.89□□□□□ -2.27
MBD4O95243 AC134878.1-201ENST00000619901 243 ntBASIC0.89□□□□□ -2.27
MBD4O95243 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.88□□□□□ -2.27
MBD4O95243 Y_RNA.269-201ENST00000364685 89 ntBASIC0.88□□□□□ -2.27
MBD4O95243 MIR1827-201ENST00000408549 66 ntBASIC0.88□□□□□ -2.27
MBD4O95243 RNU2-55P-201ENST00000411146 174 ntBASIC0.88□□□□□ -2.27
MBD4O95243 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.88□□□□□ -2.27
MBD4O95243 RNA5SP220-201ENST00000516298 104 ntBASIC0.88□□□□□ -2.27
MBD4O95243 RNU6-504P-201ENST00000516568 104 ntBASIC0.88□□□□□ -2.27
MBD4O95243 RNU6-635P-201ENST00000516651 102 ntBASIC0.88□□□□□ -2.27
MBD4O95243 AC006504.6-201ENST00000590142 199 ntBASIC0.88□□□□□ -2.27
MBD4O95243 MIR6866-201ENST00000638146 69 ntBASIC0.88□□□□□ -2.27
MBD4O95243 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.87□□□□□ -2.27
MBD4O95243 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.87□□□□□ -2.27
MBD4O95243 MIR1-1-201ENST00000362147 71 ntBASIC0.87□□□□□ -2.27
MBD4O95243 MIR335-201ENST00000362173 94 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.82-201ENST00000363000 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.92-201ENST00000363043 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.117-201ENST00000363294 101 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNU6-238P-201ENST00000363313 106 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNU6-694P-201ENST00000364071 147 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.235-201ENST00000364412 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.237-201ENST00000364439 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.306-201ENST00000365015 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.312-201ENST00000365089 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.322-201ENST00000365151 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNU6-1335P-201ENST00000365426 107 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNY3P5-201ENST00000384127 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNU6-110P-201ENST00000384508 104 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNU6-1160P-201ENST00000384546 104 ntBASIC0.87□□□□□ -2.27
MBD4O95243 MIR518F-201ENST00000384973 87 ntBASIC0.87□□□□□ -2.27
MBD4O95243 MIR605-201ENST00000385078 83 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.87□□□□□ -2.27
MBD4O95243 AC006461.1-201ENST00000412637 326 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.650-201ENST00000459002 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.777-201ENST00000516982 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.720-201ENST00000517166 92 ntBASIC0.87□□□□□ -2.27
MBD4O95243 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.771-201ENST00000598668 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.789-201ENST00000622480 102 ntBASIC0.87□□□□□ -2.27
MBD4O95243 Y_RNA.37-201ENST00000362606 108 ntBASIC0.86□□□□□ -2.27
MBD4O95243 RNU6-888P-201ENST00000363010 101 ntBASIC0.86□□□□□ -2.27
MBD4O95243 SNORA63C-201ENST00000364578 129 ntBASIC0.86□□□□□ -2.27
MBD4O95243 RNU6-580P-201ENST00000365159 107 ntBASIC0.86□□□□□ -2.27
MBD4O95243 MIR606-201ENST00000384851 96 ntBASIC0.86□□□□□ -2.27
MBD4O95243 SNORD99-201ENST00000408612 74 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 327.3 ms