Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC023449.1-201ENST00000454464 154 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 MRPS35P2-201ENST00000508242 191 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 Y_RNA.713-201ENST00000517013 96 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 AC040926.1-201ENST00000530195 238 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-40-201ENST00000606510 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD38B-202ENST00000625943 69 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 SNORD113-8-201ENST00000363497 74 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 Y_RNA.222-201ENST00000364264 102 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 RNU6-102P-201ENST00000384485 104 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 MIR588-201ENST00000384900 83 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 MIR518A1-201ENST00000385068 85 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 SNORD100-201ENST00000408573 76 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 Y_RNA.602-201ENST00000410535 92 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 RNU2-70P-201ENST00000410718 179 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 RNA5SP127-201ENST00000411051 133 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 RNU6-938P-201ENST00000411285 103 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 SNRPGP12-201ENST00000449481 213 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 RNU7-102P-201ENST00000458948 62 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 RNA5SP94-201ENST00000516917 108 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 AC090897.1-201ENST00000580909 226 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 AP000942.4-201ENST00000604811 241 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 SNORA25.18-201ENST00000607153 114 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 MIR8055-201ENST00000610739 97 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 AC006157.1-201ENST00000611750 366 ntBASIC0.17□□□□□ -2.38
SEMA3DO95025 SNORD115-28-201ENST00000363931 81 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 RNU6-144P-201ENST00000383951 107 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 Y_RNA.476-201ENST00000384347 108 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 RNU6-364P-201ENST00000384387 107 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 Y_RNA.526-201ENST00000384572 110 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 MIR518F-201ENST00000384973 87 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 MIR125B2-201ENST00000385128 89 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SEMA3DO95025 SNORA40.8-201ENST00000411034 126 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 Y_RNA.637-201ENST00000459424 114 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 AP003327.1-201ENST00000529684 127 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 AC022523.2-201ENST00000561045 150 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 AL021707.8-201ENST00000609428 183 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 AL109933.3-201ENST00000619095 188 ntBASIC0.16□□□□□ -2.38
SEMA3DO95025 Y_RNA.58-201ENST00000362807 102 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 Y_RNA.70-201ENST00000362886 110 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-1309P-201ENST00000363305 108 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 Y_RNA.154-201ENST00000363624 102 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 SNORA63C-201ENST00000364578 129 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNY3P1-201ENST00000365085 102 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 Y_RNA.315-201ENST00000365117 102 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 Y_RNA.486-201ENST00000384398 107 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 Y_RNA.529-201ENST00000384586 119 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-1319P-201ENST00000390855 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-747P-201ENST00000390928 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-241P-201ENST00000391148 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 MIR1197-201ENST00000408818 88 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-1165P-201ENST00000410119 107 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-447P-201ENST00000410293 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-1118P-201ENST00000410382 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-1076P-201ENST00000410397 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-355P-201ENST00000410427 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-791P-201ENST00000410467 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-705P-201ENST00000410601 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-1100P-201ENST00000410691 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-860P-201ENST00000410860 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-1217P-201ENST00000411276 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-785P-201ENST00000411324 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 MIR18B-201ENST00000454574 71 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU7-73P-201ENST00000458743 63 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU7-185P-201ENST00000459215 60 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU6-976P-201ENST00000516086 111 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 RNU7-156P-201ENST00000517214 74 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.15□□□□□ -2.39
SEMA3DO95025 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.15□□□□□ -2.39
SEMA3DO95025 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 AC122108.2-201ENST00000611946 526 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 U6.90-201ENST00000614007 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 AC007485.1-201ENST00000616755 206 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 U6.70-201ENST00000620287 104 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 Z97988.1-201ENST00000637697 135 ntBASIC0.15□□□□□ -2.39
SEMA3DO95025 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.14□□□□□ -2.39
SEMA3DO95025 Y_RNA.14-201ENST00000362415 103 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 Y_RNA.37-201ENST00000362606 108 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 SNORA72.1-201ENST00000363485 129 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNU4-67P-201ENST00000364569 141 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNU6-1283P-201ENST00000365314 105 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNU6-1138P-201ENST00000365359 106 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 SNORA40.5-201ENST00000391061 128 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNU6-602P-201ENST00000411155 105 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 SNORD71-201ENST00000411292 86 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.14□□□□□ -2.39
SEMA3DO95025 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.14□□□□□ -2.39
SEMA3DO95025 HSPE1P25-201ENST00000455484 251 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 FGF7P4-201ENST00000509595 295 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNU6-693P-201ENST00000516134 107 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 RNU6-397P-201ENST00000516226 104 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 C8orf59P2-201ENST00000603441 271 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms