Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 SNORA26.5-201ENST00000391215 123 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 MIR1257-201ENST00000408490 117 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.02□□□□□ -2.41
NPHP4O75161 RNU6-911P-201ENST00000516523 104 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 SNORD92-201ENST00000585078 85 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 MIR8055-201ENST00000610739 97 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.02□□□□□ -2.41
NPHP4O75161 AC073869.6-201ENST00000640656 341 ntBASIC-0.02□□□□□ -2.41
NPHP4O75161 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
NPHP4O75161 MIR409-201ENST00000362237 79 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 RNU4-80P-201ENST00000363200 141 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 SNORA72.4-201ENST00000384174 132 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 RNU6-937P-201ENST00000384325 106 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 MIR644A-201ENST00000385262 94 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 MTND1P14-201ENST00000427400 950 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 RNU6-448P-201ENST00000517052 107 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 AC007751.1-201ENST00000529260 376 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 AC112693.2-201ENST00000556538 232 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 VN1R91P-201ENST00000594377 169 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.03□□□□□ -2.41
NPHP4O75161 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD12C-201ENST00000386307 89 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 RNU6-383P-201ENST00000410864 94 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SEPT7P4-201ENST00000437076 306 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 RNU7-149P-201ENST00000516739 59 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.04□□□□□ -2.42
NPHP4O75161 AC022140.2-201ENST00000623500 188 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 MTND4LP32-201ENST00000636111 270 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-34-201ENST00000362441 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-12-201ENST00000362583 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-29-201ENST00000362834 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-9-201ENST00000362912 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-21-201ENST00000362963 81 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-14-201ENST00000363090 81 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-13-201ENST00000363358 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-41-201ENST00000363608 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-11-201ENST00000363616 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-5-201ENST00000363633 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-39-201ENST00000363694 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-4-201ENST00000363810 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-16-201ENST00000363887 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-6-201ENST00000363942 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-42-201ENST00000364273 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORA63C-201ENST00000364578 129 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-15-201ENST00000364809 81 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-1-201ENST00000364961 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-26-201ENST00000365067 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-10-201ENST00000365073 81 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD81.2-201ENST00000365153 76 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-43-201ENST00000365503 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-36-201ENST00000365629 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 RNU6V-201ENST00000384105 107 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD116-4-201ENST00000384733 96 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 RNU6-602P-201ENST00000411155 105 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 AC069271.1-201ENST00000445577 156 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 MTATP6P26-201ENST00000445926 662 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 snoU13.2-201ENST00000459201 104 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 RNU6-559P-201ENST00000516151 98 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 AC141557.1-201ENST00000540982 400 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.04□□□□□ -2.42
NPHP4O75161 AC104408.1-201ENST00000605241 170 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 SNORD115-40-201ENST00000606510 82 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 Z97988.1-201ENST00000637697 135 ntBASIC-0.04□□□□□ -2.42
NPHP4O75161 MIR101-1-201ENST00000362265 75 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 RNU6-308P-201ENST00000390957 107 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 RNU6-938P-201ENST00000411285 103 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 MTCO1P5-201ENST00000433573 344 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 AC099799.1-201ENST00000439809 192 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 AL049861.1-201ENST00000603130 150 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 AP000942.4-201ENST00000604811 241 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 AC010205.1-201ENST00000616668 449 ntBASIC-0.05□□□□□ -2.42
NPHP4O75161 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 RNU6-490P-201ENST00000362985 107 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 RNU6-21P-201ENST00000384710 107 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 RNU2-59P-201ENST00000410482 191 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 RNU7-73P-201ENST00000458743 63 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 AC122108.2-201ENST00000611946 526 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 MIR6755-201ENST00000619993 66 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 MIR4272-201ENST00000635924 64 ntBASIC-0.06□□□□□ -2.42
NPHP4O75161 MIR30D-201ENST00000362283 70 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 SNORD115-28-201ENST00000363931 81 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 SNORA1.1-201ENST00000364671 133 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms