Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RN7SKP88-201ENST00000516847 250 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 CYP3A52P-201ENST00000563326 91 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 MIR3671-201ENST00000580455 88 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 MIR548AR-201ENST00000582191 57 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 7SK.8-201ENST00000612110 250 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 7SK.11-201ENST00000615477 250 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 7SK.13-201ENST00000622040 250 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 AP000648.3-201ENST00000623539 4507 ntBASIC1.66□□□□□ -2.14
CTNND1O60716 Y_RNA.66-201ENST00000362862 102 ntBASIC1.65□□□□□ -2.15
CTNND1O60716 RNU6-275P-201ENST00000364910 107 ntBASIC1.65□□□□□ -2.15
CTNND1O60716 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
CTNND1O60716 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.65□□□□□ -2.15
CTNND1O60716 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
CTNND1O60716 RNU6-165P-201ENST00000517170 99 ntBASIC1.65□□□□□ -2.15
CTNND1O60716 AC007751.1-201ENST00000529260 376 ntBASIC1.65□□□□□ -2.15
CTNND1O60716 MIR4764-201ENST00000580680 88 ntBASIC1.65□□□□□ -2.15
CTNND1O60716 SNORD115-28-201ENST00000363931 81 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 Y_RNA.233-201ENST00000364407 101 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 SNORA1.2-201ENST00000365189 134 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 RNU6-1067P-201ENST00000384752 107 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 MIR518E-201ENST00000385252 88 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 MRPS18CP4-201ENST00000535821 231 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 AC072026.1-201ENST00000605023 201 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 U6.106-201ENST00000636360 105 ntBASIC1.64□□□□□ -2.15
CTNND1O60716 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CTNND1O60716 Y_RNA.29-201ENST00000362570 113 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 RNU6-1318P-201ENST00000365389 103 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 Y_RNA.412-201ENST00000384001 104 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 MIR518F-201ENST00000384973 87 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 AC087499.4-201ENST00000448505 178 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 SNORD111.1-201ENST00000516421 86 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 RNU6-1270P-201ENST00000517128 108 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 RNU7-181P-201ENST00000517234 74 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 RNU6-794P-201ENST00000517261 64 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 AP002392.1-201ENST00000537692 208 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 AC134878.1-201ENST00000619901 243 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 MIR8065-201ENST00000620577 100 ntBASIC1.63□□□□□ -2.15
CTNND1O60716 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.63□□□□□ -2.15
CTNND1O60716 RNU6-312P-201ENST00000364629 107 ntBASIC1.62□□□□□ -2.15
CTNND1O60716 RNU6-53P-201ENST00000365367 106 ntBASIC1.62□□□□□ -2.15
CTNND1O60716 Y_RNA.785-201ENST00000384290 109 ntBASIC1.62□□□□□ -2.15
CTNND1O60716 MIR548A2-201ENST00000384956 97 ntBASIC1.62□□□□□ -2.15
CTNND1O60716 SNORA81.3-201ENST00000517283 198 ntBASIC1.62□□□□□ -2.15
CTNND1O60716 AC090425.1-201ENST00000610007 140 ntBASIC1.62□□□□□ -2.15
CTNND1O60716 AL096861.1-201ENST00000610899 123 ntBASIC1.62□□□□□ -2.15
CTNND1O60716 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CTNND1O60716 Y_RNA.370-201ENST00000365589 108 ntBASIC1.61□□□□□ -2.15
CTNND1O60716 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
CTNND1O60716 SNORD28B-201ENST00000390993 75 ntBASIC1.61□□□□□ -2.15
CTNND1O60716 RNA5SP102-201ENST00000516865 106 ntBASIC1.61□□□□□ -2.15
CTNND1O60716 AC022559.1-201ENST00000520905 205 ntBASIC1.61□□□□□ -2.15
CTNND1O60716 MIR378D2-201ENST00000580636 98 ntBASIC1.61□□□□□ -2.15
CTNND1O60716 Y_RNA.23-201ENST00000362496 106 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 Y_RNA.37-201ENST00000362606 108 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CTNND1O60716 RNU6-1054P-201ENST00000411293 104 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.6□□□□□ -2.15
CTNND1O60716 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 AC107297.1-201ENST00000459991 176 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 AL133373.1-201ENST00000497098 94 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 RNU6-1219P-201ENST00000516143 112 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.6□□□□□ -2.15
CTNND1O60716 AC091895.1-201ENST00000624494 256 ntBASIC1.6□□□□□ -2.15
CTNND1O60716 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.59□□□□□ -2.15
CTNND1O60716 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
CTNND1O60716 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
CTNND1O60716 Y_RNA.224-201ENST00000364308 111 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 RNU6-643P-201ENST00000384018 107 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 MTND5P15-201ENST00000434246 349 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 RNU7-120P-201ENST00000459334 63 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 SNORD116-25-201ENST00000516517 92 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 MIR4431-201ENST00000579990 94 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 MIR3192-201ENST00000584920 77 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
CTNND1O60716 Y_RNA.118-201ENST00000363300 101 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 Y_RNA.410-201ENST00000383992 113 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.58□□□□□ -2.16
CTNND1O60716 AF228730.3-201ENST00000436691 102 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 RNU7-41P-201ENST00000515917 61 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 AP003484.1-201ENST00000530974 250 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 AC004792.1-201ENST00000614523 137 ntBASIC1.58□□□□□ -2.16
CTNND1O60716 Y_RNA.241-201ENST00000364470 117 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 Y_RNA.537-201ENST00000384626 109 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 Y_RNA.542-201ENST00000384641 111 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 SNORA40.5-201ENST00000391061 128 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 RNU6-938P-201ENST00000411285 103 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 AC006461.1-201ENST00000412637 326 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 AC108059.2-201ENST00000434626 151 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 RNU6-182P-201ENST00000516970 105 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 AC008133.2-201ENST00000624540 351 ntBASIC1.57□□□□□ -2.16
CTNND1O60716 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.57□□□□□ -2.16
CTNND1O60716 SNORD115-34-201ENST00000362441 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-12-201ENST00000362583 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-29-201ENST00000362834 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-9-201ENST00000362912 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-21-201ENST00000362963 81 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-14-201ENST00000363090 81 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms