Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 snoU13.9-201ENST00000458927 103 ntBASIC1.49□□□□□ -2.17
LDB2O43679 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.49□□□□□ -2.17
LDB2O43679 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
LDB2O43679 AC134878.1-201ENST00000619901 243 ntBASIC1.49□□□□□ -2.17
LDB2O43679 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.49□□□□□ -2.17
LDB2O43679 AC106754.2-201ENST00000623006 233 ntBASIC1.49□□□□□ -2.17
LDB2O43679 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.49□□□□□ -2.17
LDB2O43679 RNU6-1292P-201ENST00000383856 107 ntBASIC1.48□□□□□ -2.17
LDB2O43679 Y_RNA.400-201ENST00000383963 111 ntBASIC1.48□□□□□ -2.17
LDB2O43679 SNORA1-201ENST00000384107 130 ntBASIC1.48□□□□□ -2.17
LDB2O43679 RNU6-746P-201ENST00000384112 109 ntBASIC1.48□□□□□ -2.17
LDB2O43679 MIR653-201ENST00000385279 96 ntBASIC1.48□□□□□ -2.17
LDB2O43679 AC005908.1-201ENST00000468701 347 ntBASIC1.48□□□□□ -2.17
LDB2O43679 RNU4-57P-201ENST00000515980 135 ntBASIC1.48□□□□□ -2.17
LDB2O43679 RNU6-917P-201ENST00000516294 104 ntBASIC1.48□□□□□ -2.17
LDB2O43679 DNAJC19P9-201ENST00000555084 351 ntBASIC1.48□□□□□ -2.17
LDB2O43679 MIR3129-201ENST00000581095 76 ntBASIC1.48□□□□□ -2.17
LDB2O43679 FAM106DP-201ENST00000586416 501 ntBASIC1.48□□□□□ -2.17
LDB2O43679 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
LDB2O43679 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LDB2O43679 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
LDB2O43679 Y_RNA.37-201ENST00000362606 108 ntBASIC1.47□□□□□ -2.17
LDB2O43679 RNU4-11P-201ENST00000365287 132 ntBASIC1.47□□□□□ -2.17
LDB2O43679 MIR624-201ENST00000385217 97 ntBASIC1.47□□□□□ -2.17
LDB2O43679 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.47□□□□□ -2.17
LDB2O43679 RNA5SP127-201ENST00000411051 133 ntBASIC1.47□□□□□ -2.17
LDB2O43679 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.47□□□□□ -2.17
LDB2O43679 AF228730.3-201ENST00000436691 102 ntBASIC1.47□□□□□ -2.17
LDB2O43679 AC087499.4-201ENST00000448505 178 ntBASIC1.47□□□□□ -2.17
LDB2O43679 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
LDB2O43679 AC092991.1-201ENST00000477176 376 ntBASIC1.47□□□□□ -2.17
LDB2O43679 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
LDB2O43679 RNU6-322P-201ENST00000516010 103 ntBASIC1.47□□□□□ -2.17
LDB2O43679 SNORA18.4-201ENST00000516440 124 ntBASIC1.47□□□□□ -2.17
LDB2O43679 RNU1-92P-201ENST00000517017 135 ntBASIC1.47□□□□□ -2.17
LDB2O43679 AC090049.2-201ENST00000550377 109 ntBASIC1.47□□□□□ -2.17
LDB2O43679 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LDB2O43679 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
LDB2O43679 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
LDB2O43679 RNU6-1082P-201ENST00000364574 107 ntBASIC1.46□□□□□ -2.18
LDB2O43679 RNU6-818P-201ENST00000364837 108 ntBASIC1.46□□□□□ -2.18
LDB2O43679 Y_RNA.410-201ENST00000383992 113 ntBASIC1.46□□□□□ -2.18
LDB2O43679 Y_RNA.506-201ENST00000384494 102 ntBASIC1.46□□□□□ -2.18
LDB2O43679 RNU6-125P-201ENST00000384505 107 ntBASIC1.46□□□□□ -2.18
LDB2O43679 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
LDB2O43679 SNORD77.3-201ENST00000391113 65 ntBASIC1.46□□□□□ -2.18
LDB2O43679 AL603908.1-201ENST00000406098 201 ntBASIC1.46□□□□□ -2.18
LDB2O43679 MIR548M-201ENST00000408260 86 ntBASIC1.46□□□□□ -2.18
LDB2O43679 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
LDB2O43679 SUMO1P3-201ENST00000439961 304 ntBASIC1.46□□□□□ -2.18
LDB2O43679 Y_RNA.703-201ENST00000516846 111 ntBASIC1.46□□□□□ -2.18
LDB2O43679 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
LDB2O43679 AC112693.2-201ENST00000556538 232 ntBASIC1.46□□□□□ -2.18
LDB2O43679 MIR4781-201ENST00000585250 76 ntBASIC1.46□□□□□ -2.18
LDB2O43679 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.46□□□□□ -2.18
LDB2O43679 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
LDB2O43679 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
LDB2O43679 Y_RNA.215-201ENST00000364204 112 ntBASIC1.45□□□□□ -2.18
LDB2O43679 RNU6-1336P-201ENST00000383886 109 ntBASIC1.45□□□□□ -2.18
LDB2O43679 U8.17-201ENST00000391292 132 ntBASIC1.45□□□□□ -2.18
LDB2O43679 MIR513C-201ENST00000401352 84 ntBASIC1.45□□□□□ -2.18
LDB2O43679 AL451046.2-201ENST00000403074 277 ntBASIC1.45□□□□□ -2.18
LDB2O43679 RNU6-588P-201ENST00000410281 105 ntBASIC1.45□□□□□ -2.18
LDB2O43679 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.45□□□□□ -2.18
LDB2O43679 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
LDB2O43679 AC009474.2-201ENST00000451383 136 ntBASIC1.45□□□□□ -2.18
LDB2O43679 SNORD123-201ENST00000459473 70 ntBASIC1.45□□□□□ -2.18
LDB2O43679 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.45□□□□□ -2.18
LDB2O43679 MIR548X2-201ENST00000579776 100 ntBASIC1.45□□□□□ -2.18
LDB2O43679 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.45□□□□□ -2.18
LDB2O43679 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
LDB2O43679 SNORD33-201ENST00000362761 85 ntBASIC1.44□□□□□ -2.18
LDB2O43679 SNORA1.2-201ENST00000365189 134 ntBASIC1.44□□□□□ -2.18
LDB2O43679 RNU6-1189P-201ENST00000383958 107 ntBASIC1.44□□□□□ -2.18
LDB2O43679 Y_RNA.488-201ENST00000384403 102 ntBASIC1.44□□□□□ -2.18
LDB2O43679 RNU6-938P-201ENST00000411285 103 ntBASIC1.44□□□□□ -2.18
LDB2O43679 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.44□□□□□ -2.18
LDB2O43679 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
LDB2O43679 SNORD36C-201ENST00000516733 66 ntBASIC1.44□□□□□ -2.18
LDB2O43679 SNORA18.7-201ENST00000516910 131 ntBASIC1.44□□□□□ -2.18
LDB2O43679 SNORA74.3-201ENST00000517108 154 ntBASIC1.44□□□□□ -2.18
LDB2O43679 AP003484.1-201ENST00000530974 250 ntBASIC1.44□□□□□ -2.18
LDB2O43679 MIR3133-201ENST00000583157 78 ntBASIC1.44□□□□□ -2.18
LDB2O43679 AL513534.2-201ENST00000603836 250 ntBASIC1.44□□□□□ -2.18
LDB2O43679 AL365434.2-201ENST00000607979 234 ntBASIC1.44□□□□□ -2.18
LDB2O43679 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
LDB2O43679 RNU6-774P-201ENST00000363238 107 ntBASIC1.43□□□□□ -2.18
LDB2O43679 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
LDB2O43679 AC079140.2-201ENST00000506193 142 ntBASIC1.43□□□□□ -2.18
LDB2O43679 TRMT112P2-201ENST00000512910 132 ntBASIC1.43□□□□□ -2.18
LDB2O43679 RNU7-181P-201ENST00000517234 74 ntBASIC1.43□□□□□ -2.18
LDB2O43679 MIR5197-201ENST00000583721 112 ntBASIC1.43□□□□□ -2.18
LDB2O43679 AC131055.1-201ENST00000584626 316 ntBASIC1.43□□□□□ -2.18
LDB2O43679 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LDB2O43679 MIR337-201ENST00000362281 93 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-34-201ENST00000362441 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-12-201ENST00000362583 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-29-201ENST00000362834 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-9-201ENST00000362912 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-21-201ENST00000362963 81 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms