Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 SNORD19B-201ENST00000459623 84 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 AC098869.1-201ENST00000481627 292 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 RNU6-863P-201ENST00000515989 104 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 RNU6-155P-201ENST00000516347 100 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 RNU7-110P-201ENST00000516891 62 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 MIR3152-201ENST00000579801 74 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 AC113195.1-201ENST00000579952 141 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 AC131055.1-201ENST00000584626 316 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 AC006006.1-201ENST00000603082 144 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 AC134503.1-201ENST00000633048 54 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU6-580P-201ENST00000365159 107 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU6-144P-201ENST00000383951 107 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 MIR548A2-201ENST00000384956 97 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU6-1248P-201ENST00000391096 64 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNA5SP95-201ENST00000410319 137 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU6-897P-201ENST00000517135 105 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 MIR8055-201ENST00000610739 97 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.58-201ENST00000362807 102 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.230-201ENST00000364348 109 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU4-50P-201ENST00000364361 141 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNY3P1-201ENST00000365085 102 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.529-201ENST00000384586 119 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 MT-TN-201ENST00000387400 73 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 AL512326.2-201ENST00000426359 151 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU7-73P-201ENST00000458743 63 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 SEPT14P8-201ENST00000508026 178 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU6-408P-201ENST00000515910 100 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 RNU6-126P-201ENST00000516685 103 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 SNORA20.3-201ENST00000516880 132 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 AC007485.1-201ENST00000616755 206 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 AL162376.1-201ENST00000624117 175 ntBASIC0.18□□□□□ -2.38
COL6A6A6NMZ7 MIR1-1-201ENST00000362147 71 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU6-654P-201ENST00000364373 107 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.581-201ENST00000391017 97 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU6-159P-201ENST00000391080 106 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU6-876P-201ENST00000391295 104 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.602-201ENST00000410535 92 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AL035398.1-201ENST00000430869 322 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AC100767.1-201ENST00000528178 123 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RAC1P9-201ENST00000604990 392 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU6-94P-201ENST00000607728 107 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AC131280.1-202ENST00000624067 4211 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU5E-4P-201ENST00000364931 120 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 SNORA22B-201ENST00000383876 138 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.384-201ENST00000383909 102 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.418-201ENST00000384029 102 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU6-535P-201ENST00000384722 107 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU6-994P-201ENST00000410507 111 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AC002429.1-201ENST00000437672 148 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU7-185P-201ENST00000459215 60 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 RNU6-830P-201ENST00000516353 107 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AC131281.1-201ENST00000522984 164 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 AL136317.1-201ENST00000612653 226 ntBASIC0.17□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.5-201ENST00000362334 102 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-34-201ENST00000362441 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-12-201ENST00000362583 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-29-201ENST00000362834 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-9-201ENST00000362912 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-21-201ENST00000362963 81 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-14-201ENST00000363090 81 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 RNU4-80P-201ENST00000363200 141 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-13-201ENST00000363358 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-41-201ENST00000363608 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-11-201ENST00000363616 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-5-201ENST00000363633 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-39-201ENST00000363694 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-4-201ENST00000363810 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-16-201ENST00000363887 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-6-201ENST00000363942 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-42-201ENST00000364273 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-15-201ENST00000364809 81 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-1-201ENST00000364961 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-26-201ENST00000365067 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-10-201ENST00000365073 81 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-43-201ENST00000365503 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-36-201ENST00000365629 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 RNU6-945P-201ENST00000383947 107 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD38B-201ENST00000384690 67 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORA40.5-201ENST00000391061 128 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 RNU7-62P-201ENST00000458856 62 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 RNU7-102P-201ENST00000458948 62 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SERF1AP1-201ENST00000514575 187 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 RNU6-998P-201ENST00000515894 101 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 AC138869.1-201ENST00000568623 124 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-40-201ENST00000606510 82 ntBASIC0.16□□□□□ -2.38
COL6A6A6NMZ7 AC084781.2-201ENST00000615568 161 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms