Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR6844-201ENST00000637122 62 ntBASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC85CA6NKD9 RNA5SP127-201ENST00000411051 133 ntBASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 RNU6-917P-201ENST00000516294 104 ntBASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 RNU6-250P-201ENST00000516958 103 ntBASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 AC090049.2-201ENST00000550377 109 ntBASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 AC015726.2-201ENST00000620112 122 ntBASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 AC091895.1-201ENST00000624494 256 ntBASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC85CA6NKD9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC85CA6NKD9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CCDC85CA6NKD9 RNU6-151P-201ENST00000364158 107 ntBASIC2.17□□□□□ -2.06
CCDC85CA6NKD9 SNRPGP19-201ENST00000603826 189 ntBASIC2.17□□□□□ -2.06
CCDC85CA6NKD9 AL365434.2-201ENST00000607979 234 ntBASIC2.17□□□□□ -2.06
CCDC85CA6NKD9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC85CA6NKD9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 Y_RNA.37-201ENST00000362606 108 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 Y_RNA.68-201ENST00000362881 102 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 Y_RNA.215-201ENST00000364204 112 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 RNU4-11P-201ENST00000365287 132 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 SNORD77.3-201ENST00000391113 65 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 MIR548M-201ENST00000408260 86 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 RNU6-938P-201ENST00000411285 103 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 AF228730.3-201ENST00000436691 102 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 RNU7-197P-201ENST00000458836 62 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 snoU13.9-201ENST00000458927 103 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
CCDC85CA6NKD9 ICE2P2-201ENST00000483823 2787 ntBASIC2.15□□□□□ -2.06
CCDC85CA6NKD9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 MIR6073-201ENST00000352083 89 ntBASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 MIR516B2-201ENST00000385190 85 ntBASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 AC008834.1-201ENST00000511612 175 ntBASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 RNA5SP402-201ENST00000517148 110 ntBASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 AC112693.2-201ENST00000556538 232 ntBASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 MIR3129-201ENST00000581095 76 ntBASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 MIR5197-201ENST00000583721 112 ntBASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC85CA6NKD9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 Y_RNA.251-201ENST00000364551 99 ntBASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 SNORD50.2-201ENST00000365465 70 ntBASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 RNA5SP259-201ENST00000365541 109 ntBASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 AC005908.1-201ENST00000468701 347 ntBASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 MIR548X2-201ENST00000579776 100 ntBASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 AL513534.2-201ENST00000603836 250 ntBASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 MIR502-201ENST00000606349 86 ntBASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC85CA6NKD9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 SNORD33-201ENST00000362761 85 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 RNU6-818P-201ENST00000364837 108 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 SNORD37.2-201ENST00000391075 66 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 U8.17-201ENST00000391292 132 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 MIR3133-201ENST00000583157 78 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 AC131055.1-201ENST00000584626 316 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 FAM106DP-201ENST00000586416 501 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 AL157834.3-201ENST00000615543 103 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 AC131280.1-202ENST00000624067 4211 ntBASIC2.13□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-34-201ENST00000362441 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-12-201ENST00000362583 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-29-201ENST00000362834 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-9-201ENST00000362912 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-21-201ENST00000362963 81 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-14-201ENST00000363090 81 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-13-201ENST00000363358 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-41-201ENST00000363608 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-11-201ENST00000363616 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-5-201ENST00000363633 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-39-201ENST00000363694 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORA7.1-201ENST00000363750 139 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-4-201ENST00000363810 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-16-201ENST00000363887 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-6-201ENST00000363942 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-42-201ENST00000364273 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-15-201ENST00000364809 81 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-1-201ENST00000364961 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-26-201ENST00000365067 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-10-201ENST00000365073 81 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORA1.2-201ENST00000365189 134 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-43-201ENST00000365503 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-36-201ENST00000365629 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 RNU6-1189P-201ENST00000383958 107 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 MIR569-201ENST00000385228 96 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 RNU6-588P-201ENST00000410281 105 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 AL392103.1-201ENST00000447000 198 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 RNU6-322P-201ENST00000516010 103 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORA18.4-201ENST00000516440 124 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORA74.3-201ENST00000517108 154 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SNORD115-40-201ENST00000606510 82 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC85CA6NKD9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC85CA6NKD9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms