Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 RNU6-831P-201ENST00000384548 107 ntBASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 MIR7-2-201ENST00000384970 110 ntBASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC244250.2-201ENST00000418731 148 ntBASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 MIR2053-201ENST00000459295 91 ntBASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORA25.16-201ENST00000516741 121 ntBASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORD114-11-201ENST00000363738 75 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORA26.6-201ENST00000391256 115 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 MIR876-201ENST00000401147 81 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 HMGN2P22-201ENST00000427588 175 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 MTND1P2-201ENST00000430604 821 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC114755.3-201ENST00000481111 251 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORD36C-201ENST00000516733 66 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU7-149P-201ENST00000516739 59 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 AP003072.1-201ENST00000531740 145 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 DEFB117-201ENST00000602356 141 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC122108.2-201ENST00000611946 526 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC011476.5-201ENST00000615594 130 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 MIR6717-201ENST00000622747 73 ntBASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.64□□□□□ -2.51
TRBV6-4A0A1B0GX49 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORD115-24-201ENST00000363528 82 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORA63.5-201ENST00000363548 123 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORA1-201ENST00000384107 130 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU6-480P-201ENST00000384332 107 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 SNORA8.3-201ENST00000384679 139 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 DEFB108C-201ENST00000400154 252 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 MIR548L-201ENST00000408303 86 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU7-141P-201ENST00000459304 62 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU6-998P-201ENST00000515894 101 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 RN7SKP295-201ENST00000517264 153 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC141846.1-201ENST00000568348 142 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 MIR4790-201ENST00000577799 79 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 AL590491.3-201ENST00000610731 82 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 MIR6507-201ENST00000613630 70 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC087588.2-201ENST00000617667 426 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC084368.1-201ENST00000620935 65 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 AC024614.3-201ENST00000637860 256 ntBASIC-0.65□□□□□ -2.51
TRBV6-4A0A1B0GX49 RNA5SP205-201ENST00000364653 136 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 SNORD115-47-201ENST00000391226 86 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU7-96P-201ENST00000459535 64 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 MTND5P5-201ENST00000503764 376 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 NAMPTP3-201ENST00000569273 224 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 AP001180.6-201ENST00000584918 159 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 AC005357.1-201ENST00000588399 301 ntBASIC-0.66□□□□□ -2.52
TRBV6-4A0A1B0GX49 MIR101-2-201ENST00000362195 79 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 SNORD81.1-201ENST00000363064 77 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-653P-201ENST00000363074 106 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-99P-201ENST00000364721 107 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-259P-201ENST00000383999 107 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNY3P4-201ENST00000384428 101 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 SNORA69.1-201ENST00000390904 137 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU2-14P-201ENST00000411053 191 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU7-45P-201ENST00000459460 63 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 AC006362.1-201ENST00000567392 174 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 MIR4659A-201ENST00000580269 81 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.67□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-949P-201ENST00000384040 107 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 MIR548A2-201ENST00000384956 97 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 SNORD78.2-201ENST00000391076 69 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 AC009161.1-201ENST00000417306 376 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 AC024067.1-201ENST00000426199 223 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-693P-201ENST00000516134 107 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-415P-201ENST00000516252 97 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU2-31P-201ENST00000516954 155 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU7-161P-201ENST00000517289 62 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 AC073869.9-201ENST00000641610 120 ntBASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.68□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.69□□□□□ -2.52
TRBV6-4A0A1B0GX49 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.69□□□□□ -2.52
TRBV6-4A0A1B0GX49 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.69□□□□□ -2.52
TRBV6-4A0A1B0GX49 MTND4LP11-201ENST00000422184 280 ntBASIC-0.69□□□□□ -2.52
TRBV6-4A0A1B0GX49 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms