Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-383P-201ENST00000410864 94 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 MIR18B-201ENST00000454574 71 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.715-201ENST00000517082 110 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 MIR8055-201ENST00000610739 97 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 MIR6740-201ENST00000618268 113 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 Z97988.1-201ENST00000637697 135 ntBASIC0.26□□□□□ -2.37
KCNIP3Q9Y2W7 RNU4-90P-201ENST00000362773 141 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 SNORA63.7-201ENST00000365579 123 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.445-201ENST00000384168 102 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD38B-201ENST00000384690 67 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-913P-201ENST00000390913 95 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-1009P-201ENST00000390996 107 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 SNORA40.5-201ENST00000391061 128 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD100-201ENST00000408573 76 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 MTCO1P5-201ENST00000433573 344 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.637-201ENST00000459424 114 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 MRPS35P2-201ENST00000508242 191 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 AC108729.3-201ENST00000513484 108 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-496P-201ENST00000516145 99 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD77.4-201ENST00000516158 81 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 RNA5SP102-201ENST00000516865 106 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-958P-201ENST00000516995 106 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 MIR4662B-201ENST00000579498 81 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 AL049861.1-201ENST00000603130 150 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 AC007485.1-201ENST00000616755 206 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD38B-202ENST00000625943 69 ntBASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
KCNIP3Q9Y2W7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 MIR96-201ENST00000362288 78 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.14-201ENST00000362415 103 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 RNU1-93P-201ENST00000364704 169 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.569-201ENST00000384749 103 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD115-46-201ENST00000390982 71 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-938P-201ENST00000411285 103 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 MIR4714-201ENST00000580728 77 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 AC010332.2-201ENST00000613083 1904 ntBASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.24□□□□□ -2.37
KCNIP3Q9Y2W7 MIR367-201ENST00000362299 68 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.58-201ENST00000362807 102 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.154-201ENST00000363624 102 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.183-201ENST00000363882 113 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 RNY3P1-201ENST00000365085 102 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.356-201ENST00000365475 113 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.579-201ENST00000390939 94 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.602-201ENST00000410535 92 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 RNU7-53P-201ENST00000516705 60 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 MIR5692C2-201ENST00000577959 77 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 uc_338.22-201ENST00000622722 187 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 AC112487.2-201ENST00000637950 304 ntBASIC0.23□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.37-201ENST00000362606 108 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-1272P-201ENST00000362776 107 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 RNY1P10-201ENST00000363268 113 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.395-201ENST00000383945 109 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.424-201ENST00000384063 103 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 SNORA27-201ENST00000384323 126 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 MIR548A2-201ENST00000384956 97 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 MIR518F-201ENST00000384973 87 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 MIR518A1-201ENST00000385068 85 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 MIR125B2-201ENST00000385128 89 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 Y_RNA.639-201ENST00000458981 102 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 RPS29P24-201ENST00000486345 171 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 MIR4724-201ENST00000579485 89 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 AC124312.5-201ENST00000604451 268 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 AC090574.1-201ENST00000623186 233 ntBASIC0.22□□□□□ -2.37
KCNIP3Q9Y2W7 SNORD24-201ENST00000383884 75 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 Y_RNA.486-201ENST00000384398 107 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 MIR588-201ENST00000384900 83 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 Y_RNA.581-201ENST00000391017 97 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-321P-201ENST00000410912 106 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 AC098934.3-201ENST00000430450 190 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 MTND4P19-201ENST00000446659 478 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 MTND4LP30-201ENST00000454092 297 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 RNU7-102P-201ENST00000458948 62 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 snoU13.2-201ENST00000459201 104 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-397P-201ENST00000516226 104 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-126P-201ENST00000516685 103 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 RNU2-31P-201ENST00000516954 155 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 MIR4498-201ENST00000577599 66 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 SNORD92-201ENST00000585078 85 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 AC008608.1-201ENST00000603910 127 ntBASIC0.21□□□□□ -2.38
KCNIP3Q9Y2W7 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 RNA5SP517-201ENST00000364724 117 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-364P-201ENST00000384387 107 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 MIR563-201ENST00000385080 79 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 MIR1257-201ENST00000408490 117 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 SNORA40.8-201ENST00000411034 126 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms