Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNA5SP57-201ENST00000459463 123 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 AL627230.6-201ENST00000611129 280 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 AC021506.2-201ENST00000612354 169 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 U6.95-201ENST00000636931 70 ntBASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PPARGC1AQ9UBK2 PGBD4P5-201ENST00000445958 426 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 AL021397.1-201ENST00000451806 248 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 Y_RNA.651-201ENST00000459380 103 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 RNU7-12P-201ENST00000516030 62 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-772P-201ENST00000516042 105 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 AP003484.1-201ENST00000530974 250 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 MIR3914-2-201ENST00000637339 95 ntBASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PPARGC1AQ9UBK2 RNA5SP126-201ENST00000365092 109 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 Y_RNA.353-201ENST00000365440 108 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 Y_RNA.440-201ENST00000384120 114 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 MIR660-201ENST00000385235 97 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 MIR676-201ENST00000390702 67 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 RN7SKP223-201ENST00000410582 62 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 RN7SKP192-201ENST00000411291 327 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 HMGN2P19-201ENST00000425149 265 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 RNU7-107P-201ENST00000459121 61 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 MIR376A2-201ENST00000636782 80 ntBASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PPARGC1AQ9UBK2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 AC092881.1-201ENST00000638218 2733 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-235P-201ENST00000362644 107 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 SNORA2.2-201ENST00000365473 135 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 SNORA40.5-201ENST00000391061 128 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 AC099513.1-201ENST00000490423 301 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 RPS26P48-201ENST00000491713 339 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
PPARGC1AQ9UBK2 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 MIR424-201ENST00000362227 98 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 Y_RNA.454-201ENST00000384224 113 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 RNU6-938P-201ENST00000411285 103 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 RNU7-80P-201ENST00000459562 61 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 RN7SL429P-201ENST00000479090 223 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 RN7SL489P-201ENST00000486185 223 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 RN7SL327P-201ENST00000488659 223 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 AC133485.4-201ENST00000561835 220 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 AC138907.4-201ENST00000570107 226 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 MIR4299-201ENST00000577899 72 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 AL773524.1-201ENST00000614065 229 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 RN7SL853P-201ENST00000617250 223 ntBASIC2.22□□□□□ -2.05
PPARGC1AQ9UBK2 SNORD58C-201ENST00000365223 64 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6-1056P-201ENST00000383996 107 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 MIRLET7F2-201ENST00000385277 83 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 RNA5SP212-201ENST00000391223 107 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD36C-201ENST00000516733 66 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 RNU7-70P-201ENST00000516941 66 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 SNORA31.17-201ENST00000516953 127 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-34-201ENST00000362441 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-12-201ENST00000362583 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-29-201ENST00000362834 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-9-201ENST00000362912 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-21-201ENST00000362963 81 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-14-201ENST00000363090 81 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-13-201ENST00000363358 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-41-201ENST00000363608 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-11-201ENST00000363616 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-5-201ENST00000363633 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-39-201ENST00000363694 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-4-201ENST00000363810 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-16-201ENST00000363887 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-6-201ENST00000363942 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-42-201ENST00000364273 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-15-201ENST00000364809 81 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-1-201ENST00000364961 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-26-201ENST00000365067 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-10-201ENST00000365073 81 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORA1.2-201ENST00000365189 134 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-43-201ENST00000365503 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-36-201ENST00000365629 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 MIR136-201ENST00000385207 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 AC244636.1-201ENST00000421152 228 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 RN7SKP19-201ENST00000516016 252 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORA18.7-201ENST00000516910 131 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 MIR4778-201ENST00000577635 80 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 SNORD115-40-201ENST00000606510 82 ntBASIC2.2□□□□□ -2.06
PPARGC1AQ9UBK2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms