Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP496-201ENST00000391240 109 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 MIR1252-201ENST00000408861 65 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 MRPS35P2-201ENST00000508242 191 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 RNU6-897P-201ENST00000517135 105 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 MIR548AO-201ENST00000579992 96 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 uc_338.4-201ENST00000616635 176 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 AC243994.1-201ENST00000618627 109 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 AC022140.2-201ENST00000623500 188 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.14-201ENST00000362415 103 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.419-201ENST00000384041 102 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 MT-TN-201ENST00000387400 73 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 MTCO1P5-201ENST00000433573 344 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 RNU2-13P-201ENST00000515909 113 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 AP000753.3-201ENST00000604083 169 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 RAC1P9-201ENST00000604990 392 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 AC037487.3-201ENST00000606668 112 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 AC013791.1-201ENST00000616619 62 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
CLCF1Q9UBD9 MIR377-201ENST00000362145 69 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.31-201ENST00000362574 102 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 RNU6-290P-201ENST00000365212 101 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.389-201ENST00000383924 113 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.581-201ENST00000391017 97 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 RNU1-119P-201ENST00000391122 165 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 PMCHL1-202ENST00000423102 261 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 RNU7-25P-201ENST00000516544 62 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 RNU7-149P-201ENST00000516739 59 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 RNU6-988P-201ENST00000519081 107 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
CLCF1Q9UBD9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 MIR367-201ENST00000362299 68 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.28-201ENST00000362554 111 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 RNU6-450P-201ENST00000364654 107 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 RNU6-580P-201ENST00000365159 107 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 RNU6-1138P-201ENST00000365359 106 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.380-201ENST00000365663 111 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 RNU6-514P-201ENST00000384208 107 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.547-201ENST00000384654 119 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 SNORA53-201ENST00000391141 249 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 MIR548O-201ENST00000408583 114 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 RNU6-383P-201ENST00000410864 94 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 MTATP6P23-201ENST00000440153 476 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 snoU13.16-201ENST00000459350 104 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.637-201ENST00000459424 114 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 SNORA40.15-201ENST00000516884 107 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 RNU2-31P-201ENST00000516954 155 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 MIR5692C2-201ENST00000577959 77 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 AL021707.8-201ENST00000609428 183 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.47□□□□□ -2.33
CLCF1Q9UBD9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 MIR4724-201ENST00000579485 89 ntBASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 MIR4662B-201ENST00000579498 81 ntBASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 MIR4264-201ENST00000583520 66 ntBASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 AL049861.1-201ENST00000603130 150 ntBASIC0.46□□□□□ -2.34
CLCF1Q9UBD9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORA25.1-201ENST00000362326 128 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-34-201ENST00000362441 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-12-201ENST00000362583 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 RNU6-1272P-201ENST00000362776 107 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-29-201ENST00000362834 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-9-201ENST00000362912 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-21-201ENST00000362963 81 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-14-201ENST00000363090 81 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-13-201ENST00000363358 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-41-201ENST00000363608 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-11-201ENST00000363616 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-5-201ENST00000363633 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-39-201ENST00000363694 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-4-201ENST00000363810 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-16-201ENST00000363887 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-6-201ENST00000363942 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-42-201ENST00000364273 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-15-201ENST00000364809 81 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-1-201ENST00000364961 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-26-201ENST00000365067 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-10-201ENST00000365073 81 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 RNU6-326P-201ENST00000365480 107 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-43-201ENST00000365503 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-36-201ENST00000365629 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.393-201ENST00000383936 102 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 RNA5SP193-201ENST00000410353 107 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.631-201ENST00000459607 101 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 RNA5SP480-201ENST00000516840 109 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms