Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNORD44.1-201ENST00000363202 61 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.166-201ENST00000363730 102 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 RNU6-268P-201ENST00000364174 107 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 RNU6-890P-201ENST00000384121 107 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 RNU6-35P-201ENST00000384530 107 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 SNORA40.5-201ENST00000391061 128 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.605-201ENST00000410577 105 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.635-201ENST00000459041 101 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 RNU6-155P-201ENST00000516347 100 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 RNU6-1046P-201ENST00000516538 107 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 AC093027.1-201ENST00000546698 429 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 AC005357.1-201ENST00000588399 301 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 AC112487.2-201ENST00000637950 304 ntBASIC0.14□□□□□ -2.39
CCDC88CQ9P219 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNU6-740P-201ENST00000364734 105 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNU6-708P-201ENST00000384217 107 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.541-201ENST00000384640 113 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 MIR518F-201ENST00000384973 87 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 MIR548O-201ENST00000408583 114 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.13□□□□□ -2.39
CCDC88CQ9P219 HSPE1P25-201ENST00000455484 251 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNU7-185P-201ENST00000459215 60 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.13□□□□□ -2.39
CCDC88CQ9P219 CYCTP-201ENST00000504253 315 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.13□□□□□ -2.39
CCDC88CQ9P219 AC011373.1-201ENST00000607270 237 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 MIR376A1-201ENST00000616574 68 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.142-201ENST00000363491 102 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNA5SP368-201ENST00000364298 116 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 SNORA72.4-201ENST00000384174 132 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 MIR125B2-201ENST00000385128 89 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 SNORA26.5-201ENST00000391215 123 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNU6-383P-201ENST00000410864 94 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNU6-847P-201ENST00000411115 108 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 AL035398.1-201ENST00000430869 322 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNU7-73P-201ENST00000458743 63 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 SNORA40.14-201ENST00000516543 86 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 RNU7-116P-201ENST00000516940 62 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.13□□□□□ -2.39
CCDC88CQ9P219 AC090897.1-201ENST00000580909 226 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 AP000942.4-201ENST00000604811 241 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 SNORA25.18-201ENST00000607153 114 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 uc_338.16-201ENST00000621804 95 ntBASIC0.13□□□□□ -2.39
CCDC88CQ9P219 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CCDC88CQ9P219 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.12□□□□□ -2.39
CCDC88CQ9P219 RNU6-490P-201ENST00000362985 107 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 SNORA72.1-201ENST00000363485 129 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.387-201ENST00000383918 102 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 RNU6-679P-201ENST00000391003 106 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 RNY4P36-201ENST00000391116 96 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 RNU6-101P-201ENST00000410323 104 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 AC067940.1-201ENST00000458411 300 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 RNU7-67P-201ENST00000459003 62 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.666-201ENST00000516187 112 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 RNU7-25P-201ENST00000516544 62 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 AC022523.2-201ENST00000561045 150 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 AL080274.1-201ENST00000605565 220 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 AL121655.1-201ENST00000605811 308 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 AC084781.2-201ENST00000615568 161 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 uc_338.22-201ENST00000622722 187 ntBASIC0.12□□□□□ -2.39
CCDC88CQ9P219 RNU6-1209P-201ENST00000363655 107 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.248-201ENST00000364501 109 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 RNU6-484P-201ENST00000384016 107 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 RNU6-1323P-201ENST00000384025 107 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 SNORA26.6-201ENST00000391256 115 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 RNA5SP395-201ENST00000516567 118 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 RNU6-1007P-201ENST00000516586 107 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC040926.1-201ENST00000530195 238 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC127455.1-201ENST00000565496 145 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC010205.1-201ENST00000616668 449 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 MIR4272-201ENST00000635924 64 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 MIR342-201ENST00000362212 99 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.5-201ENST00000362334 102 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.26-201ENST00000362539 101 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.160-201ENST00000363677 92 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.197-201ENST00000364004 102 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.813-201ENST00000364639 102 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.424-201ENST00000384063 103 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.462-201ENST00000384268 102 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.529-201ENST00000384586 119 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 RNU6-177P-201ENST00000411257 104 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC015818.7-201ENST00000428754 109 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 POLR2KP2-201ENST00000438155 177 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC087499.7-201ENST00000441958 109 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.11□□□□□ -2.39
CCDC88CQ9P219 SNORD123-201ENST00000459473 70 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 RNU6-875P-201ENST00000516488 106 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 RNA5SP285-201ENST00000516619 119 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.11□□□□□ -2.39
CCDC88CQ9P219 MIR4300-201ENST00000581016 96 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 MIR2681-201ENST00000581814 105 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC008507.4-201ENST00000585464 127 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 AC122108.2-201ENST00000611946 526 ntBASIC0.11□□□□□ -2.39
CCDC88CQ9P219 Y_RNA.42-201ENST00000362660 108 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 SNORD115-28-201ENST00000363931 81 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 SNORD114-9-201ENST00000364370 72 ntBASIC0.1□□□□□ -2.39
CCDC88CQ9P219 RNU6-806P-201ENST00000365147 105 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms