Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RNU7-96P-201ENST00000459535 64 ntBASIC2.38□□□□□ -2.03
UBP1Q9NZI7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.38□□□□□ -2.03
UBP1Q9NZI7 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
UBP1Q9NZI7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
UBP1Q9NZI7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
UBP1Q9NZI7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBP1Q9NZI7 RNU6-414P-201ENST00000363705 104 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 RNA5SP126-201ENST00000365092 109 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 SNORD58C-201ENST00000365223 64 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 MIR194-1-201ENST00000384892 85 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 AC244636.1-201ENST00000421152 228 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.37□□□□□ -2.03
UBP1Q9NZI7 RN7SKP19-201ENST00000516016 252 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
UBP1Q9NZI7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.37□□□□□ -2.03
UBP1Q9NZI7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
UBP1Q9NZI7 Y_RNA.353-201ENST00000365440 108 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 RNU6-1056P-201ENST00000383996 107 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 SNORA70.7-201ENST00000384159 133 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 MIR526A1-201ENST00000384897 85 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 AC004965.1-201ENST00000413033 213 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 RPS29P24-201ENST00000486345 171 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 RNU7-181P-201ENST00000517234 74 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 AC090821.2-201ENST00000523552 176 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 AC022254.1-201ENST00000567857 235 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 MIR4287-201ENST00000579398 78 ntBASIC2.36□□□□□ -2.03
UBP1Q9NZI7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
UBP1Q9NZI7 RNU6-661P-201ENST00000362409 107 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 Y_RNA.346-201ENST00000365385 112 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 RNU6-203P-201ENST00000384038 104 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 Y_RNA.525-201ENST00000384570 113 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 RN7SKP192-201ENST00000411291 327 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 JTBP1-201ENST00000441314 247 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 AC091932.4-201ENST00000623386 200 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
UBP1Q9NZI7 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.03
UBP1Q9NZI7 Y_RNA.370-201ENST00000365589 108 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 RNY1P6-201ENST00000384193 109 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 MIRLET7F2-201ENST00000385277 83 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 RNA5SP136-201ENST00000410906 107 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 AL035398.1-201ENST00000430869 322 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 RPL23AP6-201ENST00000446637 472 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 SNORD123-201ENST00000459473 70 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 RNU6-998P-201ENST00000515894 101 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 MIR4713-201ENST00000582691 75 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 AC108081.1-201ENST00000604358 221 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.34□□□□□ -2.03
UBP1Q9NZI7 AL137067.1-201ENST00000615933 120 ntBASIC2.34□□□□□ -2.03
UBP1Q9NZI7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
UBP1Q9NZI7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNU6-349P-201ENST00000362402 107 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNU4-82P-201ENST00000362443 140 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNU6-457P-201ENST00000363999 107 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNU6-690P-201ENST00000365242 106 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNU6-1067P-201ENST00000384752 107 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNU6-1064P-201ENST00000410626 104 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 AL161935.2-201ENST00000414627 60 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNA5SP281-201ENST00000516504 135 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 FAM106DP-201ENST00000586416 501 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 AC002984.1-201ENST00000591692 448 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 AC025166.1-201ENST00000612411 163 ntBASIC2.33□□□□□ -2.04
UBP1Q9NZI7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
UBP1Q9NZI7 RNA5SP508-201ENST00000411327 119 ntBASIC2.32□□□□□ -2.04
UBP1Q9NZI7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.32□□□□□ -2.04
UBP1Q9NZI7 RN7SL429P-201ENST00000479090 223 ntBASIC2.32□□□□□ -2.04
UBP1Q9NZI7 RN7SL489P-201ENST00000486185 223 ntBASIC2.32□□□□□ -2.04
UBP1Q9NZI7 RN7SL327P-201ENST00000488659 223 ntBASIC2.32□□□□□ -2.04
UBP1Q9NZI7 RNU6-781P-201ENST00000516377 101 ntBASIC2.32□□□□□ -2.04
UBP1Q9NZI7 RNA5SP24-201ENST00000516478 95 ntBASIC2.32□□□□□ -2.04
UBP1Q9NZI7 RN7SL853P-201ENST00000617250 223 ntBASIC2.32□□□□□ -2.04
UBP1Q9NZI7 AL596211.1-201ENST00000569873 2277 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBP1Q9NZI7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBP1Q9NZI7 MIR302B-201ENST00000362188 73 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 Y_RNA.366-201ENST00000365540 102 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 SNORA67.4-201ENST00000384688 142 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 RNU6-476P-201ENST00000384726 107 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 UBL5P3-201ENST00000475112 231 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 RNU2-13P-201ENST00000515909 113 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 RNU6-240P-201ENST00000516098 97 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 SNORA74.3-201ENST00000517108 154 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 SUMO2P16-201ENST00000519475 264 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 DEFB122-202ENST00000569013 197 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 MIR4435-1-201ENST00000582552 80 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 MIR3124-201ENST00000582636 67 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBP1Q9NZI7 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
UBP1Q9NZI7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
UBP1Q9NZI7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
UBP1Q9NZI7 MIR342-201ENST00000362212 99 ntBASIC2.3□□□□□ -2.04
UBP1Q9NZI7 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
UBP1Q9NZI7 RNU6-1144P-201ENST00000384247 104 ntBASIC2.3□□□□□ -2.04
UBP1Q9NZI7 Y_RNA.494-201ENST00000384432 111 ntBASIC2.3□□□□□ -2.04
UBP1Q9NZI7 SNX2P2-201ENST00000424553 323 ntBASIC2.3□□□□□ -2.04
UBP1Q9NZI7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms